Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2397 ATGGCCGATTTCCAAGGCTACATCCAACTTTTTATCATTTGGGCAGTGTCCACCATCCTGGTTCGAGCCATACTCACCAGAAAACAGAGAAGGCCTCATCACCCACCTAGCCCACTAGCCTTACCTATCATTGGACACCTCCACCTTCTTGCTCCCATCCCTCACCAAGCTCTTACCAAACTCTCAACCCGCTATGGACCCATAATGCAGCTTTTCCTTGGTTCTGTCCCTTGTGTCGTAGCTTCCACTCCAGAAGTCGCCATTGAGTTCCTCAAAACTCACGAAGCATGTTTCTCTAACCGCCCTCAAAGTTCTGCGGTTGACCTCTTAACATATGGCTCCCAAGACTTCTCCTTTGCTCCATATGGACCCTATTGGAAGTTCATGAAGAAACTGTGCATGTCCGAGCTTCTCGGTGGCCGGACACTGGACCAGCTCCTTCCGGTGAGGAGGCAAGAGACGGCGAGGTTTCTGAGACTTTTGCTGGAGAAATCGAAGGGAGCTGAAGCCGTAGATGTCCAGGGAGAGCTCCTGACATTATCGAATAATATCGTCTCAAGAATGATTATGAGCCAAACGTGCAGTGAGGATGATGATGAAGCTAAAGAAGAGGTGAGGAAGTTAGTGAAAGACACCGCCGAGCTCACAGGGAAGTTTAATGTGTCGGACTTTATTTGGTTTTGTAAGAATCTGGATTTGCAGGGTTTCAACAAAAGGATAAAGGAAATCAGGGACAGGTTTGACATCATTATGGACAGAGCAATAACAGAGCACGAAGAAGAAAGGAAGAAGATGAAGGAAATAGGTGGAGGTAATCAGGCGAAGGATCTGCTTCATATTTTGCTAGACATATATGAAGATGAGAGCTCTGAGATCAAATTGACCAAAGAGAACATAAAGGCCTTCATCCTCGACATATTTATGGCAGGAACCGACACTTCTGCCTTAACTACCGAATGGGCTCTGGCAGAGTTAATAAACCACCCACTTGTGATGGAGAAAGCAAGACAAGAGATCGATAGTGTAATAGGGAGGAATAGAATACTAGAAGAATCAGACCTTCCCAATCTTCCCTACCTGCAAGCTATAGTTAAAGAAACACTGAGGATTCACCCTACAGGTCCATTAATTGTGAGGGAATCATCCGAGAGCTGCAATGTGTGTGGGTACGAGATTCCAGCGAAGACCCAGTTGTTTGTGAATGTGTGGGCAATTGGTAGGGACCCAAACCACTGGGAAAACCCACTAGAGTTCAGGCCAGAGAGGTTCGTCAGTGAAGAGGGAAGTGGGAGGAGGCAGCTAGATGTAAGAGGACAGCACTTCCAGCTAATCCCATTTGGGAGCGGAAGAAGAGGGTGTCCTGGAACCTCGCTGGCTTTACAAGTAGTGCAGGCGAATCTCGGTGCCATGATTCAGTGCTTTGGGTGGAGGGTGAATGGAGGGAAGGAGACAGTGACCATGGAAGAGAAACCTGGGCTAACCCTTTCAAGGGCGCGTCCTTTGATTTGTGTCCCTGTGCCTAGGCTTCATCCATTTCCTTCCGTCTGA 1548 0.478 MADFQGYIQLFIIWAVSTILVRAILTRKQRRPHHPPSPLALPIIGHLHLLAPIPHQALTKLSTRYGPIMQLFLGSVPCVVASTPEVAIEFLKTHEACFSNRPQSSAVDLLTYGSQDFSFAPYGPYWKFMKKLCMSELLGGRTLDQLLPVRRQETARFLRLLLEKSKGAEAVDVQGELLTLSNNIVSRMIMSQTCSEDDDEAKEEVRKLVKDTAELTGKFNVSDFIWFCKNLDLQGFNKRIKEIRDRFDIIMDRAITEHEEERKKMKEIGGGNQAKDLLHILLDIYEDESSEIKLTKENIKAFILDIFMAGTDTSALTTEWALAELINHPLVMEKARQEIDSVIGRNRILEESDLPNLPYLQAIVKETLRIHPTGPLIVRESSESCNVCGYEIPAKTQLFVNVWAIGRDPNHWENPLEFRPERFVSEEGSGRRQLDVRGQHFQLIPFGSGRRGCPGTSLALQVVQANLGAMIQCFGWRVNGGKETVTMEEKPGLTLSRARPLICVPVPRLHPFPSV 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2397 515 PRINTS E-class P450 group I signature 443 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g2397 515 PRINTS E-class P450 group I signature 361 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g2397 515 PRINTS E-class P450 group I signature 401 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g2397 515 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g2397 515 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g2397 515 PRINTS E-class P450 group I signature 453 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g2397 515 PRINTS E-class P450 group I signature 298 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g2397 515 PRINTS E-class P450 group I signature 318 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g2397 515 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g2397 515 Pfam Cytochrome P450 35 503 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g2397 515 Coils Coil 332 352 - -
Glsi02g2397 515 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 446 455 IPR017972 GO:0005506|GO:0016705
Glsi02g2397 515 Gene3D Cytochrome P450 19 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g2397 515 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 11 502 - -
Glsi02g2397 515 PRINTS P450 superfamily signature 309 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g2397 515 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g2397 515 PRINTS P450 superfamily signature 444 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g2397 515 PRINTS P450 superfamily signature 453 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g2397 515 SUPERFAMILY Cytochrome P450 28 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g2397 515 CDD CYP93 66 505 - -
Glsi02g2397 515 FunFam Cytochrome P450 family protein 26 503 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2397 Glsi-ChrGlsi02 74169997 74171621 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2397 1 508 Cytochrome P450 AT5G06900 51.081 0.0 530