Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2396 ATGCATATGTACTTGGTCACAAAAGACAGGGAATCCAGTCTGAAACATAGAACAAACTACCTTATAAATATCTCTCTTTGGGTGACCCTATATCCTGCAACTAAAGTGCAGAACATGGACAATATTCAAAGCTACTTATTCATCTTCCTCATTTGGCTAGTCTCCATAGCCTTGGTCAGAGCCATATTCACCAGAACTAGACCAAAGTTTCGCCTTCCACCTGGTCCATTGGCCTTACCAATTATTGGACACTTACACCTATTCAAACCAACTCCATATGAAGCTCTTCAGAGGCTCTCAAACCTTTATGGACCCTTGATTCAAATCTATCTTGGGTCCGTTCCGTATGTTGTTGTCGGATCTGCAGAAATAGCGAAAGAAGTCCTAAATACTCATGATGTTTCTTTCTGTAACAGGCCCCCCAACACCGCTATTAGTTATCTCACTTATAACGCAGCTGATTTTGCATTTGCCCCGTATGGAACCTACTGGAGGTTCATGAAGAAGTTTTGTATGTCAGAACTTCTTAATGGTCGGATGCTGGATCTATTCCTTCCAATCAGGCAAGAAGAGATAAATAGGTTTTTGCACATGATGCTGAAAAAAGCTGAAGTGGGTGACGCTGCTGATGTTGGAGGCGAGCTAATTAAGCTGTTAGATAACATAATAATGAGAATGGCAATAAGCAAAACCTGTTTTAACTCTGAAAATGATGCTCATGAAGTGAGAAAGAGGATCAGAGAGTCATTCAAGCTGAGTAGAAAGTTTAATCTGTCAGATTATTTTTGGTTATGTAGAAAACTAGATATCCAAGGGTTTGGAAAAAGGCTAAAGGAAGTCCGTGATAGTTTTGATTCAATGATTGAAGAGGTTATACGGGAGCACGAAAAGGCAAGGAAGGAGCTGAGGAGAAAAGATGCAGCAAGCGACATACTTGATGTTATGCTGAGTGTATCAGAAGATGAAAGCTCAGAGGTCAAAATGACCAGAGATAACATAAAAGCGTTCCTAAAGGATATATTTGAAGGTGGGACAGAGACGACAGCCACGACCATAGAATGGGCGCTAAAAGAACTAATTAACCATCCAACTGCTATGGAGAAAGCAAGGAAGGAAATAGATTCTGTGATTGGAAAAGGAAGAATAGTAATGGAATCAGATATAAGTAACCTTCCGTACCTCCATGCTGTGGTGAAGGAGTCACTTCGTCTTCACCCTCCTGGTCCATTGGTGCTGAGAGAGTCAATTGTCAGGTGCAGCATTGCTGGTTATGACATTCCAGCGAACACTCGAGTGTTCATTAATGTGTGGGCTCTAGGGAGGGACCCCAAGTACTGGGATAACCCACTTGAGTTCCAGCCAGAAAGGTTTATGAGGAAAGAGGAGAGTGGGAAGAAGAGGGAATTGGATGTAAGGGGACAACACTATCAACTTTTACCCTTTGGAAGTGGAAGAAGAAGATGCCCTGCAATTTCACTAGCACTCAACATTATTCAAACCAGCCTTGCTGCTATGATTCAGTGTTTTGAATGGAAGGTAGGAAATGGTGGCAATGGCAATGTTGATGTGAAAGAGAAGCCTGCAGTTACTGTTGCAACAACTAATCCGCTGATTTGTATCCCCGCACCTAGGCTCGCTCCCTTTCCCCCCTTGTCACACTGA 1662 0.4248 MHMYLVTKDRESSLKHRTNYLINISLWVTLYPATKVQNMDNIQSYLFIFLIWLVSIALVRAIFTRTRPKFRLPPGPLALPIIGHLHLFKPTPYEALQRLSNLYGPLIQIYLGSVPYVVVGSAEIAKEVLNTHDVSFCNRPPNTAISYLTYNAADFAFAPYGTYWRFMKKFCMSELLNGRMLDLFLPIRQEEINRFLHMMLKKAEVGDAADVGGELIKLLDNIIMRMAISKTCFNSENDAHEVRKRIRESFKLSRKFNLSDYFWLCRKLDIQGFGKRLKEVRDSFDSMIEEVIREHEKARKELRRKDAASDILDVMLSVSEDESSEVKMTRDNIKAFLKDIFEGGTETTATTIEWALKELINHPTAMEKARKEIDSVIGKGRIVMESDISNLPYLHAVVKESLRLHPPGPLVLRESIVRCSIAGYDIPANTRVFINVWALGRDPKYWDNPLEFQPERFMRKEESGKKRELDVRGQHYQLLPFGSGRRRCPAISLALNIIQTSLAAMIQCFEWKVGNGGNGNVDVKEKPAVTVATTNPLICIPAPRLAPFPPLSH 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2396 553 Coils Coil 288 308 - -
Glsi02g2396 553 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 481 490 IPR017972 GO:0005506|GO:0016705
Glsi02g2396 553 PRINTS P450 superfamily signature 343 360 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g2396 553 PRINTS P450 superfamily signature 396 407 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g2396 553 PRINTS P450 superfamily signature 479 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g2396 553 PANTHER CYTOCHROME P450 98A9 50 546 - -
Glsi02g2396 553 Pfam Cytochrome P450 73 520 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g2396 553 SUPERFAMILY Cytochrome P450 73 544 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g2396 553 FunFam Cytochrome P450 family protein 64 539 - -
Glsi02g2396 553 CDD CYP93 104 541 - -
Glsi02g2396 553 Gene3D Cytochrome P450 63 537 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g2396 553 PRINTS E-class P450 group I signature 332 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g2396 553 PRINTS E-class P450 group I signature 124 145 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g2396 553 PRINTS E-class P450 group I signature 395 413 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g2396 553 PRINTS E-class P450 group I signature 488 511 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g2396 553 PRINTS E-class P450 group I signature 100 119 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g2396 553 PRINTS E-class P450 group I signature 435 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g2396 553 PRINTS E-class P450 group I signature 352 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g2396 553 PRINTS E-class P450 group I signature 478 488 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2396 Glsi-ChrGlsi02 74163291 74165445 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2396 39 546 Cytochrome P450 AT5G06900 44.902 4.74e-164 474