Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2393 ATGATGTTTTGGAATCAGTTGTTTCAGAAGATAATATCGGGTTTCCAGTTTGGTTTTATCATCATCAACTTGATGTTGGTGATATTGGGTAGTTGGATATTTCGCTCTAACATTCTTGCCGAACGTCTTGGAGCAGGACCAATTTTTGCTGAGCCAGTGGACTGGTTACTTGGTGGCATATTATTCTTCTTCTGCATGACGCCAAAGGCAGAGGGATATGAAATAAGAAGCTGCTCAGCCAGTCAACTGGCTACTTTGATGAGTGGTGCAGCGTACTGTAACCTTATTTTCAAGCCAAATTATCCAACCATGGTTGCCCATTCTGATAGCATTTTGCTCATCAGCATGTGCTGCTTAGTTGTGCTTATTTGCACTATCCTTTTCATTGTCAAGCCTTTTAGCATACTACTCATCAAGTCTGGCTCCAAACATCGACCACTACCTAGCCCACCGGGTCTACCCATCATTGGCCACCTTCACCTTCTTGGCTCAGTCGCCATTCCAAAATGTTTCCAGAATCTGGCTCGTCTCTATGGCCCTCTCATGCAACTTCGTTTAGGTGCATCCAAGAGCCTAATTGTCTCCAATGCGCAAGTTGCGAGAGAAGTCTATAAAACCCATGAGCTCAATTTCTGTTACCGCCCACATTTTGGATCCTCTGATTATTTCCAGTACAAAGGCTCTTATTTCATCACTGCCCCTTATGGCCCTTATTGGCGCTTCATGAAGAAACTATGTGTGACCCAACTCCTCTCAAACTCGCAGCTTAGCCGCTTCACTCATATCCGAGAGCAAGAGATCAGGAGTCTCTTAGAATCTCTTACCGTGTGTTCTAGTGAAGCAAAAGCATCTGATTTGAGCTTAAAGTTGACTGCTTTGACAAACAATATCTTATGTCGGATGGCTATGAGCACCACTTGCTTGGACGGTAATGATGCTGAGGAGATTCATGGTTTGGTTAGGGAGTTCTTGGAAGTAGGAGCTAAGTTAAGCTTAGGTGAAGTGTTAGGGCCTTTGGGGAAGTTGGACTTATTTGGGTATGGAAAAAAGGTCGTAAAAATAGTGGGCAAATTCGACCAGATGTTGGAGAGGATCATGAAGGAACACGAGGAGAAACACAGTAAGAAGGCTTACGAAGGAGAAAGTAAAGACATGATGGACATATTATTAGAAGTTTATGGAGATCCCAATGCTGAAGTGAAGTTAACAAGAAACGACATCAAGGTTTTTTTCCTAGAAATATTTCTTGCGGGCACGGACACTTCTTCAGTGGCGTTGCAATGGGCAATGGCAGAGATCATAAACCACCCACGAGTGTTGAACAAGTTAAGGGCGGAGATGAATTCGGTGGTGGGAACAAGCAGGTTAGTCACAGAATGTGATGTTCCAAACCTTCCTTACCTCCAAGCTGTTGTGAAGGAAGTGCTTAGGCTCCACCCTTCCGCACCCTTCGCTCTAAGACAATCTGCTGAGGACTGCAACATCAACGGCTATGATGTAAAGGGTCAGACAAGGACCCTAGTCAACGTCTATGCCATCATGCGGGACCCAGAGGCGTGGGTGGACCCAGAGGAGTTCATACCTGAGAGGTTCTTGGATGAGATGAAGGGTGGACATGATTTCAGGTATATTCCATTTGGGAGTGGCAGGAGAGGATGCCCTGGGGCCTCCCTTGCATTAACCGTGATACAGGCCACAATTGCGGCCTTAATTCAGTGCTTCGATTGGAAAGTCAAAGGTGGGGACAAAGTTGACGTGGAAGAAGGGTCAGGATTCTCTGTGGGATTGGCCAAGCCATTAGTTTGTTACCCTATCAAACGTCTTAATCTGCTTCAGGTTTAA 1842 0.4533 MMFWNQLFQKIISGFQFGFIIINLMLVILGSWIFRSNILAERLGAGPIFAEPVDWLLGGILFFFCMTPKAEGYEIRSCSASQLATLMSGAAYCNLIFKPNYPTMVAHSDSILLISMCCLVVLICTILFIVKPFSILLIKSGSKHRPLPSPPGLPIIGHLHLLGSVAIPKCFQNLARLYGPLMQLRLGASKSLIVSNAQVAREVYKTHELNFCYRPHFGSSDYFQYKGSYFITAPYGPYWRFMKKLCVTQLLSNSQLSRFTHIREQEIRSLLESLTVCSSEAKASDLSLKLTALTNNILCRMAMSTTCLDGNDAEEIHGLVREFLEVGAKLSLGEVLGPLGKLDLFGYGKKVVKIVGKFDQMLERIMKEHEEKHSKKAYEGESKDMMDILLEVYGDPNAEVKLTRNDIKVFFLEIFLAGTDTSSVALQWAMAEIINHPRVLNKLRAEMNSVVGTSRLVTECDVPNLPYLQAVVKEVLRLHPSAPFALRQSAEDCNINGYDVKGQTRTLVNVYAIMRDPEAWVDPEEFIPERFLDEMKGGHDFRYIPFGSGRRGCPGASLALTVIQATIAALIQCFDWKVKGGDKVDVEEGSGFSVGLAKPLVCYPIKRLNLLQV 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2393 613 Pfam Cytochrome P450 148 594 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g2393 613 FunFam Cytochrome P450 family protein 138 602 - -
Glsi02g2393 613 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 546 555 IPR017972 GO:0005506|GO:0016705
Glsi02g2393 613 CDD CYP93 179 604 - -
Glsi02g2393 613 PRINTS E-class P450 group I signature 406 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g2393 613 PRINTS E-class P450 group I signature 543 553 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g2393 613 PRINTS E-class P450 group I signature 175 194 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g2393 613 PRINTS E-class P450 group I signature 199 220 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g2393 613 PRINTS E-class P450 group I signature 426 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g2393 613 PRINTS E-class P450 group I signature 509 533 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g2393 613 PRINTS E-class P450 group I signature 553 576 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g2393 613 PRINTS E-class P450 group I signature 469 487 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g2393 613 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 127 595 - -
Glsi02g2393 613 SUPERFAMILY Cytochrome P450 142 607 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g2393 613 Gene3D Cytochrome P450 138 599 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g2393 613 PRINTS P450 superfamily signature 553 564 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g2393 613 PRINTS P450 superfamily signature 544 553 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g2393 613 PRINTS P450 superfamily signature 417 434 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g2393 613 PRINTS P450 superfamily signature 470 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2393 Glsi-ChrGlsi02 74144272 74148328 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2393 119 609 Cytochrome P450 AT2G42250 54.241 0.0 545