Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2384 ATGGAGTCTCCCGATGAGACTGGATGCCAAGCTCCAGAACGTCCAATCCTTTGCATTAATAACTGTGGCTTCTTTGGAAGGGCTGCTACCATGAATATGTGTTCCAAATGTTACAAGGACATGCTGTTGAAGCAGGAACAAGCCAAACTTGCTGCATCATCAGTTGAAAACATTGTGAATGGCAGCTCTTGCAGCAATGGGAAAGAGGCTGCAAGTGGAGGTGCTGCAGATGTACAAGTAGGAGAAGTGGAAGTTAAGAGAGTCTGTGCCAATTTTTCTGCTGATTCATCATCCTCTAGTGAGACTTTGGATGTGAAAGTCAAGACAGGTCCCAACAGATGTGCCACATGTCGGAAACGAGTTGGATTAACTGGTTTCAGCTGTAAATGTGGAAACTTCTTTTGTGCAATGCATCGCTATTCTGAAAAACATGATTGCCCTTATGATTATCGGACAGTTGGTCGGGACACTATAGCTAAAGCCAACCCTGTAATTAAGGCAGAAAAGCTTGACAAAATCTAG 522 0.4387 MESPDETGCQAPERPILCINNCGFFGRAATMNMCSKCYKDMLLKQEQAKLAASSVENIVNGSSCSNGKEAASGGAADVQVGEVEVKRVCANFSADSSSSSETLDVKVKTGPNRCATCRKRVGLTGFSCKCGNFFCAMHRYSEKHDCPYDYRTVGRDTIAKANPVIKAEKLDKI 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2384 173 ProSiteProfiles Zinc finger AN1-type profile. 108 154 IPR000058 GO:0008270
Glsi02g2384 173 Gene3D - 5 63 - -
Glsi02g2384 173 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 17 55 - -
Glsi02g2384 173 ProSiteProfiles Zinc finger A20-type profile. 12 46 IPR002653 GO:0003677|GO:0008270
Glsi02g2384 173 PANTHER AN1-TYPE ZINC FINGER PROTEIN 14 173 - -
Glsi02g2384 173 SMART AN1_Zf_4 114 151 IPR000058 GO:0008270
Glsi02g2384 173 FunFam Zinc finger AN1-type containing 6 89 169 - -
Glsi02g2384 173 Pfam AN1-like Zinc finger 114 150 IPR000058 GO:0008270
Glsi02g2384 173 SMART A20_3 15 39 IPR002653 GO:0003677|GO:0008270
Glsi02g2384 173 SUPERFAMILY AN1-like Zinc finger 104 168 IPR035896 -
Glsi02g2384 173 Gene3D - 89 169 IPR035896 -
Glsi02g2384 173 Pfam A20-like zinc finger 16 39 IPR002653 GO:0003677|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2384 Glsi-ChrGlsi02 74082905 74083426 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2384 5 173 C2H2 Transcription Factor Family AT3G52800 45.882 4.84e-41 134