Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2383 ATGGCGAAGAAGAAGAAGGCTAGGGTTTCTGATGAAGAAAAAATTGGATCGGAACATCAAGCGGAGAACCAGAATCAGAATCTAGATTCCTCCACGGAAAAGAGCCTCTACGAGGTTCTTGGTGTGGAGAGAACAGCATCTCAACAGGAAATAAAGAAAGCATACTACAAGTTGGCATTGCGGCTGCATCCTGATAAGAACCCTGGTGATGAGGAAGCTAAAGAGAAATTTCAGCAATTGCAAAAAGTAATATCAGTTCTTGGGGATGAAGAGAAAAGGACCATTTATGATCAGACTGGTTGTGTTGATGATGCTGACCTTGCAGGGGAAGTTGTTCAGAATCTTTATGAGTTTTTCAGGACAATGTACAAGAAGGTCTCTGAAGCTGATATTGAGGAGTTTGAGGCAAATTATAGGGGATCTGACTCTGAGAAAAATGATTTGATCGATCTGTACAAGAAGTGCAAGGGTAACATGAACAGGCTTTTCTGTTCAATGCTTTGTTCAGATCCTAAACTTGACTCACACCGTTTCAAGGATATTCTTGATGAGGCTATCACTGCTGGAGAACTAAAGGAAACTAAAGCCTACCAGAAATGGGCAAAGAAGGTATCTGAAACCAAACCCCCAACAAGTCCTGTAAGGAGGAGAGCAAAGTCAAATAAGCAGTCGGAAACAGATCTGTATGCAATCATATCACAACGCCGAAATGAGAGGAAGGGCCAGTTTGATTCTATGTTCTCATCTCTAGTTTCTAAATATGGAAGAGATGATATACCAGAGCCCTCTGAACAAGAATTTGAAGCTGCACAGAGAAAACTTGAAACAAGAAGGCTCTCAAAAAAATCAAAGCGTAAATAA 861 0.4088 MAKKKKARVSDEEKIGSEHQAENQNQNLDSSTEKSLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISVLGDEEKRTIYDQTGCVDDADLAGEVVQNLYEFFRTMYKKVSEADIEEFEANYRGSDSEKNDLIDLYKKCKGNMNRLFCSMLCSDPKLDSHRFKDILDEAITAGELKETKAYQKWAKKVSETKPPTSPVRRRAKSNKQSETDLYAIISQRRNERKGQFDSMFSSLVSKYGRDDIPEPSEQEFEAAQRKLETRRLSKKSKRK 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2383 286 SUPERFAMILY Chaperone J-domain 32 120 IPR036869 -
Glsi02g2383 286 MobiDBLite consensus disorder prediction 1 32 - -
Glsi02g2383 286 MobiDBLite consensus disorder prediction 209 223 - -
Glsi02g2383 286 MobiDBLite consensus disorder prediction 257 276 - -
Glsi02g2383 286 MobiDBLite consensus disorder prediction 1 19 - -
Glsi02g2383 286 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 22 286 IPR042977 -
Glsi02g2383 286 MobiDBLite consensus disorder prediction 254 286 - -
Glsi02g2383 286 MobiDBLite consensus disorder prediction 202 227 - -
Glsi02g2383 286 ProSiteProfiles dnaJ domain profile. 35 100 IPR001623 -
Glsi02g2383 286 Pfam DnaJ domain 36 97 IPR001623 -
Glsi02g2383 286 PRINTS DnaJ domain signature 72 92 IPR001623 -
Glsi02g2383 286 PRINTS DnaJ domain signature 37 55 IPR001623 -
Glsi02g2383 286 PRINTS DnaJ domain signature 55 70 IPR001623 -
Glsi02g2383 286 PRINTS DnaJ domain signature 92 111 IPR001623 -
Glsi02g2383 286 SMART dnaj_3 34 92 IPR001623 -
Glsi02g2383 286 CDD DnaJ 37 89 IPR001623 -
Glsi02g2383 286 Gene3D DnaJ domain 17 111 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2383 Glsi-ChrGlsi02 74077129 74080617 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2383 31 97 C2H2 Transcription Factor Family AT1G74250 38.889 6.50e-08 51.6