Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2366 ATGCTTGAACCGGAGGCACGTCTCATTAGATCACCATTCTTGCTATGTATCTTCATTGGGTTCTTGCTACATTCGGTTATGACTGCTGAAATTCCATTGGGTTCCAAACTTTCTGTGGTTGACAATGATTGTTGGATCTCCTCCAATGGTGATTTTGCATTAGGGTTCTTCAACATTTCAGATCCACCTAACCAGTACAGTATTGGCATTCGTTTCAACTCAAAGTCTATACCAATTAGCCAACAAACTGTGGTCTGGGTTGCTGGAGCTCATGTCACTGTAGGCAGCAATTCCTATTTCCAACTCACCCAGGAAGGAGAACTAGTCCTTTTCGATTCCTCGCAGGGAGCCCCTGCATGGACCAGTGAAACAGGCAACCGATCTGTAGTTTCAGCTGCTTTTCAAGATAATGGTAATCTTGTTCTGCTAGACAGAGAAAAACATAATATTTGGCAGAGTTTTGATACTCCATCTGATACACTTCTCCCAGGACAGAGTTTATCTGTCTTTAAAACACTTCGAGCTGACAGCAAGAAAACCAAGTCCAGTTACTACAGTCTTTACATGAATGCTTCTGGCTGGTTACAACTTCGGTGGGAAAGTAGTATTATCTATTGGACAAGTGATAGCCCTTCTATTGCAAATCTCAGTGCTTTTCTTACCACTGATGGAGCCCTGCAACTCCGAGACCAGAGTTTGAAACCTGTTTGGTCAGTGTTTGGAGAAGATCACAATGATTCTGTGAAGTATCGATTTCTTAGGCTTGATTTGGATGGCAATCTCCGCTTATATTCATGGATAGAAACTTTACAGTCATGGAGATCAGTCTGGCAAGCTGTTGAGAATCAATGCAAGGTCTTTGCAACTTGTGGTCAAAGAGGTATCTGTGTCTTGACTGCTTCAGGTTCTGCTGATTGCAGATGTCCATTTGAGGTAACTGAGACTAACGGATGTTTGGTTCCATACGAGCAGGAGTGTGAATCTGGCACCAATATGCTTCCATATAAGAGCACATTTCTATATGCAGTTTACCCACCTGAAGAGTCAGTTACCATAAGTAGTTTGCAGCAATGTGAACAGTTGTGCCTGAATGACCCACAATGTACGGTTGCAACCTTTTCCAATAATGGAAGTGCACAATGCTCAATAAAGAAAACTCAGTATGTCACTGGTTATGAAGATCCATCTCTAAGTTCGATATCTTTTGTTAAGAGATGCTCAGGTCCCTTAGCTGTAAATCCCAGTCTTATAAATTCACCTCCTTCCGAACAGCCTCCAAGACTTTGTGTTCCTTGTCTAATAGGAGCAGCCTCTGGCACATTTTTCATCTTTGCTATCCTTCAGTTGGGAATTGGATTCTGCATCTGCAGAAGAAAAAACTCTATTAGGAAAGGAGTTACTTTGGCTCTCACATTCCCCAATTCAGAGGGCGTAATTGTGTTATCATTCCCAGAAATAAAGAGCCTCACTGGGGATTTCAAGAACCCAATCGGGCCAAAGATGTTCAAGGGTGTGCTACAAAATGATCACTTGGTTGCAGTTAAGGACTTGAATGCAAACATAGAAGAAAGGAAGTTCCGGAGTGCTGTTCTGAAGATAGGGAGCATCCATCACAAGAACCTAGTGAAGCTGGAGGGTTATTGTTGTGAATTCAATTGTAGATTTCTGGTGTACGAATATGTGGAAAATGGTTCTCTGGATAAGTACCTAGATGATTCAACTCTTTGCAGGAGGCTAACTTGGAGAAAGAGAATTGAGATATGTTCAAGTGTGGCAAAGGCCATTTGCTATTTGCACACTGGGTGTAGAGAATTCGTTTGCCATGGAAACTTGAAATGTGCAAATGTGATACTGGATGAAAACTTGGGAGCCAAGGTAACTGAGTTTGGGTTTGCAAGAGTAGATGGCGAGGCATCATATTGTGGTTTCTCTGCTGAGAAAGATGTAGAGGATTTTGGCAAGTTGGTATTAACGTTGTTGACTGGGTGTCAAGATTGCGGGGAACTTTGTGAGTGGGCATATAAAGAATGGATGGAAGGTCGGTCAGAGAATGTGGTTGATAAAAGAATTGATGGTGGAATTGACTCGGAGGAGCTAGAACGTGCATTGAGAATTGCATTCTGGTGCCTTCAAATGGATCAACATAGGAGGCCTTCTATGGGGGAGGTAGTGAGAGTGCTAGATGATACATTGAACGTTGATCCTCCACCACCTCCATTTGCTGTTCAGAGGCCAATGCTGGAAGATGAAACTCATAATGGTTCAGAATCAGAAGTATAG 2280 0.425 MLEPEARLIRSPFLLCIFIGFLLHSVMTAEIPLGSKLSVVDNDCWISSNGDFALGFFNISDPPNQYSIGIRFNSKSIPISQQTVVWVAGAHVTVGSNSYFQLTQEGELVLFDSSQGAPAWTSETGNRSVVSAAFQDNGNLVLLDREKHNIWQSFDTPSDTLLPGQSLSVFKTLRADSKKTKSSYYSLYMNASGWLQLRWESSIIYWTSDSPSIANLSAFLTTDGALQLRDQSLKPVWSVFGEDHNDSVKYRFLRLDLDGNLRLYSWIETLQSWRSVWQAVENQCKVFATCGQRGICVLTASGSADCRCPFEVTETNGCLVPYEQECESGTNMLPYKSTFLYAVYPPEESVTISSLQQCEQLCLNDPQCTVATFSNNGSAQCSIKKTQYVTGYEDPSLSSISFVKRCSGPLAVNPSLINSPPSEQPPRLCVPCLIGAASGTFFIFAILQLGIGFCICRRKNSIRKGVTLALTFPNSEGVIVLSFPEIKSLTGDFKNPIGPKMFKGVLQNDHLVAVKDLNANIEERKFRSAVLKIGSIHHKNLVKLEGYCCEFNCRFLVYEYVENGSLDKYLDDSTLCRRLTWRKRIEICSSVAKAICYLHTGCREFVCHGNLKCANVILDENLGAKVTEFGFARVDGEASYCGFSAEKDVEDFGKLVLTLLTGCQDCGELCEWAYKEWMEGRSENVVDKRIDGGIDSEELERALRIAFWCLQMDQHRRPSMGEVVRVLDDTLNVDPPPPPFAVQRPMLEDETHNGSESEV 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2366 759 Gene3D - 26 156 IPR036426 -
Glsi02g2366 759 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 27 156 - -
Glsi02g2366 759 Pfam Protein tyrosine and serine/threonine kinase 507 638 IPR001245 GO:0004672|GO:0006468
Glsi02g2366 759 ProSiteProfiles PAN/Apple domain profile. 326 406 IPR003609 -
Glsi02g2366 759 Pfam D-mannose binding lectin 83 172 IPR001480 -
Glsi02g2366 759 MobiDBLite consensus disorder prediction 736 759 - -
Glsi02g2366 759 Gene3D - 157 275 IPR036426 -
Glsi02g2366 759 SUPERFAMILY alpha-D-mannose-specific plant lectins 79 209 IPR036426 -
Glsi02g2366 759 Pfam S-locus glycoprotein domain 246 308 IPR000858 GO:0048544
Glsi02g2366 759 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 561 639 - -
Glsi02g2366 759 SUPERFAMILY Protein kinase-like (PK-like) 500 727 IPR011009 -
Glsi02g2366 759 ProSiteProfiles Bulb-type lectin domain profile. 158 276 IPR001480 -
Glsi02g2366 759 Pfam PAN domain 345 389 IPR003609 -
Glsi02g2366 759 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 640 735 - -
Glsi02g2366 759 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 457 560 - -
Glsi02g2366 759 PIRSF SRK 4 640 IPR024171 GO:0004674
Glsi02g2366 759 PIRSF SRK 637 759 IPR024171 GO:0004674
Glsi02g2366 759 PANTHER OS07G0415500 PROTEIN 14 740 - -
Glsi02g2366 759 SMART blect_4 36 157 IPR001480 -
Glsi02g2366 759 SUPERFAMILY alpha-D-mannose-specific plant lectins 179 275 IPR036426 -
Glsi02g2366 759 Gene3D Transferase(Phosphotransferase) domain 1 561 734 - -
Glsi02g2366 759 Gene3D Hepatocyte Growth Factor 335 407 - -
Glsi02g2366 759 SMART ntp_6 327 405 IPR003609 -
Glsi02g2366 759 ProSiteProfiles Protein kinase domain profile. 472 731 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g2366 759 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 157 275 - -
Glsi02g2366 759 CDD B_lectin 47 157 IPR001480 -
Glsi02g2366 759 ProSiteProfiles Bulb-type lectin domain profile. 30 155 IPR001480 -
Glsi02g2366 759 Gene3D Phosphorylase Kinase; domain 1 457 560 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2366 Glsi-ChrGlsi02 73934325 73936604 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2366 419 757 Receptor kinase-like Gene Family AT4G23220 28.426 1.21e-39 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Glsi02g2366 PK_Tyr_Ser-Thr 2.8e-19 CL0016