Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2334 ATGGCTTCCTCTTCCTCTGATCCTAGCAAGTCGGAAGTTGGCTGCGGCAGTAGTGGCGGCGGTGGCGGTGCAGAGGCTTCGGAAGCAGTGATGGCCAACGACCAGCTCTTACTCTACAGGGGATTAAAGAAAGCGAAGAAAGAAAGAGGGTGTACAGCAAAAGAGCGCATCAGTAAGATGCCTCCTTGTGCTGCAGGGAAACGCAGCTCCATATACCGTGGTGTCACGAGGCATAGATGGACTGGTCGGTACGAAGCACATCTCTGGGATAAAAGTACATGGAATCAGAACCAGAATAAAAAAGGAAAACAAGGAGCATATGATGATGAAGAGGCTGCAGCAAGAGCATATGACCTTGCTGCTCTGAAATACTGGGGTCCTGGGACTCACATTAATTTTCCAGTAACCGATTATACAAGAGATCTTGAAGAAATGCAGAATGTTTCAAGAGAGGAATACCTTGTATCTTTACGGCGGAAGAGCAGTGGTTTTTCAAGAGGAATCTCAAAATATCGGGGACTCTCCAGTCGATGGGAGCCATCATATGTTCAAATGGCTGGATCTGATTACTTCAATAGTATACATTATGGTACCGTTGATGATTCAGCAGCAGAAAGCGAATATGCAAGTGGTTACTGCGGAGAAAGAAAGATTGATTTAACAAGTCACATCAAGTGGTGGGGATCCAATAAAAGTCGCCAACACGATGCTGGAACAAAATCATCAGAAGAAAAAAAACATGGATTTGCTGGAGATATTTGTGGTGAGCTTAAAATATTGGAACAGGAACTCCAACCCACTGAACCATACCAGATGCCACAGTTAGGCATCCTCCATGATGGGAGAAAACATAAAAGTTCTGCAGTCTCTGCCTTAAGTATCTTATCACGGTCAGCAGCCTACAAAAGTCTGCAAGAGAAGGCATCAAAGAGACAAGAAAATTACACAGATAATGATGAGGATGAAAACAAAAGTACCATCAATAAGTTGGACCATGGCAAGGCAGTTGATAAATCATCAAATCATGAGGGTGGCGATGAAAGACTCAATGATGCAATGGAAATGAGTGGAGCATTGTCTATCCAAAGAAATGTTTTCCCATTGACATCATTCTTATCTGCACCACTTTTGACAGCCTATAATACTGTTGATCACTTAGTAGATCCTGTTCTCTGGACGTCTCTTGTTCCTATGCTTCCTGCTGGCCTTTCTCGTGCAGCTGAGGTTACAAAGACCGAGACCAGTTCAAGCTACCCCATTTTTGGTCCAGATGAGTGA 1278 0.4397 MASSSSDPSKSEVGCGSSGGGGGAEASEAVMANDQLLLYRGLKKAKKERGCTAKERISKMPPCAAGKRSSIYRGVTRHRWTGRYEAHLWDKSTWNQNQNKKGKQGAYDDEEAAARAYDLAALKYWGPGTHINFPVTDYTRDLEEMQNVSREEYLVSLRRKSSGFSRGISKYRGLSSRWEPSYVQMAGSDYFNSIHYGTVDDSAAESEYASGYCGERKIDLTSHIKWWGSNKSRQHDAGTKSSEEKKHGFAGDICGELKILEQELQPTEPYQMPQLGILHDGRKHKSSAVSALSILSRSAAYKSLQEKASKRQENYTDNDEDENKSTINKLDHGKAVDKSSNHEGGDERLNDAMEMSGALSIQRNVFPLTSFLSAPLLTAYNTVDHLVDPVLWTSLVPMLPAGLSRAAEVTKTETSSSYPIFGPDE 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2334 425 SUPERFAMILY DNA-binding domain 70 135 IPR016177 GO:0003677
Glsi02g2334 425 MobiDBLite consensus disorder prediction 1 26 - -
Glsi02g2334 425 Pfam AP2 domain 71 126 IPR001471 GO:0003700|GO:0006355
Glsi02g2334 425 FunFam AP2-like ethylene-responsive transcription factor 70 136 - -
Glsi02g2334 425 SMART rav1_2 71 140 IPR001471 GO:0003700|GO:0006355
Glsi02g2334 425 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 33 304 - -
Glsi02g2334 425 Gene3D AP2/ERF domain 71 136 IPR036955 GO:0003700|GO:0006355
Glsi02g2334 425 ProSiteProfiles AP2/ERF domain profile. 71 134 IPR001471 GO:0003700|GO:0006355
Glsi02g2334 425 PRINTS Ethylene responsive element binding protein signature 72 83 IPR001471 GO:0003700|GO:0006355
Glsi02g2334 425 PRINTS Ethylene responsive element binding protein signature 116 136 IPR001471 GO:0003700|GO:0006355
Glsi02g2334 425 MobiDBLite consensus disorder prediction 305 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2334 Glsi-ChrGlsi02 73683163 73687710 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2334 30 409 AP2-EREBP Transcription Factor Family AT2G41710 64.103 3.58e-154 442
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Glsi02g2334 AP2 2.1e-09 CL0081