Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2319 ATGGGGTTACACAGACAATATGCGGGGAGGTATGGGGATGTTCTTCGAGAGAGGACAGCGACGATGAGGTCTTTTCGCAAAATACAAGTGATGAAGAAGAACATCACTTTTAGTCTGGTTCCATGCCCAAGTTGCAGTTTAGGTAAAGAATTTTGGGACATTGCCCCTGTGGAGCAGAGCAGCTTGTTGCCAATGGCGAACTACGACCTTACCCCACGGATCGCGCCGAATCTGGACAGGCACCTCGTATTCCCTCTTCTTGAGTTCCTGCAGGAACGCCACCTCTATGAGAACGATCAGATCCTTAAGGCCAAGATCGAGCTCCTTAACAAGACCAACATGGTCGACTATGCCATAGACATCCACAAGAGCCTCTACCACACCGAAGATGTTCCCCAAGACATGGTCGAAAGGAGGGTGGAAGTGGTGGCCAGGCTCAAGGCACTAGAGGAGGCCGCCGCTCCGCTCGTTGCCTTTCTGCAGAACCCCAGTGCCGTGCAGGATTTGAAGGCTGACAAGCAGTATAATCTTCAGATGCTCAATGACAGATACCAGTCTGGATGGCCAGGTAAAACACGTAATCAAATTGTTTCTGTAATCTGTATAATGGGTGATACTATGCTCAGTTTTACATCACCTATGAATCAGGTTCAAAGCAGAATATGGTTGATGCATTGGAGTCTCTTCATCTTTTTCAACCATGACAATGGCAGAACGCAGATTATTGATCTGTTTAATCAGGACAAGTATCAAAATGCTATTCAAACTAGTGCTCCACACCTTTTGCGATACTTGGCCACAGCATTCATTATCAACAAGCGCAGGAGACCTCAATTCAAAGATTTCATAAAGGTTATTCAACAAGAGCAGCATTCATATAAAGACCCCGTCACTGAATTTTTGGCTTGTGTTTACGTCAACTATGACTTTGATGGGGCACAACAGAAGATGAGGGAGTGTGAAGAAGTATGGGGATGTTCTTCGAGAGAGGACAGCGACGATGAGGTCTTTTCGCAAAATACAAGTGATGAAGAAGAACATCACTTTTCGTCTGGTTCCATGCCCAAGTTGCAGTTTAGGTTTGTGAAGTCCAAGGCTAGTTGGAATGATGAAATGGGAATGGGAGAAGTTATTGAAAAGAAAGGTAAATTGTGGGTAACAACTGGAATTGTTCGTAGTGGCGGGACTTATTCTTCAATTGAGGAGACTTTGTATTTGATGGAACTAGGAGCATTACATCTCATGGATAATTGTGAAACTGGCATATCTCTAGCAGACATATACAGGAAGATTGCAGGCCGGAAGGGTGGAAGTTGTTGGGAACTGTTTGAGGTTTACAGGCACCTTAAATCTCTTGGTTATGTTGTTGGGCGGCATGGTGTTGCTTGGAGTTTGAAGGGTACTAAAAGTGCCCATAAACCTATTGCTCTCGAAGGCCCTGAAGAAGGCAAACAATCCGTGGACATGGATTCCAAAGATGAGCAATTCATAAATGAGTTGTTTAGTGAGATGCAGATTAATGAATTGAAGCTAGATTTTGATGTTTATCTTCCAAACAACAGGTTTCGTAAGTCCTCTCCTGGTGATCCAAGTTTTCTGCTCCACTTGTCCAGGGGCCATCCACCATCTAGAGCAGAAATTGAAGTCCTTGAAAGACAATGCAGTGGCATTCCATTAAAAATTTCTCTAGTTGAGGATGGACGGGTCAGTTTCTTTTCTTTTGACAAGGTGGAGCTTCCTGTTCTACCCTGA 1752 0.4446 MGLHRQYAGRYGDVLRERTATMRSFRKIQVMKKNITFSLVPCPSCSLGKEFWDIAPVEQSSLLPMANYDLTPRIAPNLDRHLVFPLLEFLQERHLYENDQILKAKIELLNKTNMVDYAIDIHKSLYHTEDVPQDMVERRVEVVARLKALEEAAAPLVAFLQNPSAVQDLKADKQYNLQMLNDRYQSGWPGKTRNQIVSVICIMGDTMLSFTSPMNQVQSRIWLMHWSLFIFFNHDNGRTQIIDLFNQDKYQNAIQTSAPHLLRYLATAFIINKRRRPQFKDFIKVIQQEQHSYKDPVTEFLACVYVNYDFDGAQQKMRECEEVWGCSSREDSDDEVFSQNTSDEEEHHFSSGSMPKLQFRFVKSKASWNDEMGMGEVIEKKGKLWVTTGIVRSGGTYSSIEETLYLMELGALHLMDNCETGISLADIYRKIAGRKGGSCWELFEVYRHLKSLGYVVGRHGVAWSLKGTKSAHKPIALEGPEEGKQSVDMDSKDEQFINELFSEMQINELKLDFDVYLPNNRFRKSSPGDPSFLLHLSRGHPPSRAEIEVLERQCSGIPLKISLVEDGRVSFFSFDKVELPVLP 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2319 583 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT E 209 323 IPR016650 GO:0003743|GO:0005737|GO:0005852
Glsi02g2319 583 Pfam tRNA-splicing endonuclease subunit sen54 N-term 363 414 IPR024336 -
Glsi02g2319 583 SMART eIF3_N_2 69 185 IPR019010 -
Glsi02g2319 583 Pfam eIF3 subunit 6 N terminal domain 69 185 IPR019010 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2319 Glsi-ChrGlsi02 73511801 73517139 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2319 67 323 Eukaryotic Initiation Factors Gene Family AT3G57290 59.807 8.76e-122 365
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g2319 02 73511801 73517139 Glsi02g2319 02 73511801 73517139 ECH