Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2306 ATGGGGTCACAACCTTCTGTTCTTTATGAACATGGCTGCGTTTTATTTGTCAAAGCCTTCATAGTTGTGATCCTGAACTGTATACCAAATAAAACCAACTTATTCTGCAATAACTCTGTTGCCCCTCCGATGGTTCCGCCCTACGAGATCCTTTCATCATTGCAAACACTGGCTCTTGATGGTTACTTCGGCTTGGACGACAATGGACATGCAGCCAAGGACTTTGGCAACATATACCATTTTCCTCCTCTGGCGATTTTGCATCCAAAAACAGTTTCTGATATTTCACGCACAATAAAGCATATTTTTGAAATGGGTTCTGCTTCAGAATTTAAGGTTGCAGCTAGAGGCCACGGCTACTCTCTTCATGGTCAGGCACAAGCACATCAAGGCTTAGTTATTAACATGGAATCGCTGCAGGGACCACAGATGACAGTGCACACTGGAGAATTCCCTTACGTGGAAGTTTCAGGCGGTGAGTTGTGGATAAACATTCTGCATGAGACTCTTAAACATGGGCTAGCACCTAAATCTTGGACAGATTACCTTCATCTTACTGTTGGGGGAACTTTATCAAATGCTGGAATAAGCGGGCAAGCCTTTCGTCATGGACCCCAGATCAATAACATCTTCCAGCTGGAAGTTGTCACAGGAAAAGGAGAGGTGGTTACCTGCACAGATAACCGAAATGCCGACCTTTTTTATGGTGTTCTTGGAGGGCTTGGTCAATTTGGCATCATCACCAGGGCTAGTATTTCTCTTGAGCCAGCACCAAAGAAGGTGAAGTGGATTAGAGTGCTTTACTCAGAATTCTCTATATTTGCTAGGGATCAAGAGTACTTGATATCACTTGAAAATACATTTGACTATATCGAAGGATTCGTAATCATAAATAAAACAGGCATCCTTAATAATTGGAGGTCATCCTTTGACCCCAAAGACCCACTTCAAGCCAGCCAATTTAATTCAGATGGAAGGACCTTTTACTGTCTTGAGGCGGCAAAATACTTCAACCCAGATGAAACTGAAGCCATGAATCAGAGTGTTGACCAGCTGTTGTCAGAAATGAGTTATATTCCATCCACACTGTTCCTATCAGAAGTTTCTTACGTGAATTTCCTGGACAGAGTGCATGTTTCTGAGATGAAGCTAAGAGCAAAAGGCTTATGGGAAGTTCCCCATCCTTGGCTGAATCTTCTGATCCCGAGAAGCAGAATTCATGAGTTTGCTCAACAGGTGTTTGAGCAAATTCTTGTGGATACAAGCAATGGTCCCATACTCATATACCCCGTCAACCAGTCAAAGTGGAACCATAAAACATCTTTGGTTACCCCAGAGGAAGATGTTTTCTACCTGGTGGCATTCCTTTCCTCTGCTACAGGGAAAGACAACTTAGAATACATTATAACCCAAAACAAACGGATCCAAGATTTCTGCGTCCGTGCTCAGCTGGGAGTGAAGCAATATCTTCCCCATTACAGCACCCAAGAAGAATGGCAAGCCCACTTTGGGTGTAGATGGCAAGTGATGAGACAAAGAAAATCAGCATATGACCCACGGGCACTTCTTGCCCCTGGCCTCAAAATATTTCAAAAGCCAATACCCATCTCCAGTGAGTAA 1620 0.4346 MGSQPSVLYEHGCVLFVKAFIVVILNCIPNKTNLFCNNSVAPPMVPPYEILSSLQTLALDGYFGLDDNGHAAKDFGNIYHFPPLAILHPKTVSDISRTIKHIFEMGSASEFKVAARGHGYSLHGQAQAHQGLVINMESLQGPQMTVHTGEFPYVEVSGGELWINILHETLKHGLAPKSWTDYLHLTVGGTLSNAGISGQAFRHGPQINNIFQLEVVTGKGEVVTCTDNRNADLFYGVLGGLGQFGIITRASISLEPAPKKVKWIRVLYSEFSIFARDQEYLISLENTFDYIEGFVIINKTGILNNWRSSFDPKDPLQASQFNSDGRTFYCLEAAKYFNPDETEAMNQSVDQLLSEMSYIPSTLFLSEVSYVNFLDRVHVSEMKLRAKGLWEVPHPWLNLLIPRSRIHEFAQQVFEQILVDTSNGPILIYPVNQSKWNHKTSLVTPEEDVFYLVAFLSSATGKDNLEYIITQNKRIQDFCVRAQLGVKQYLPHYSTQEEWQAHFGCRWQVMRQRKSAYDPRALLAPGLKIFQKPIPISSE 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2306 539 PANTHER GULONOLACTONE OXIDASE 24 531 - -
Glsi02g2306 539 SUPERFAMILY FAD-linked oxidases, C-terminal domain 258 530 IPR016164 GO:0003824|GO:0050660
Glsi02g2306 539 FunFam Cytokinin dehydrogenase 2 260 489 - -
Glsi02g2306 539 SUPERFAMILY FAD-binding/transporter-associated domain-like 67 256 IPR036318 GO:0050660
Glsi02g2306 539 ProSiteProfiles PCMH-type FAD-binding domain profile. 79 257 IPR016166 GO:0071949
Glsi02g2306 539 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 258 530 IPR015345 GO:0009690|GO:0019139|GO:0050660
Glsi02g2306 539 Gene3D - 136 259 IPR016169 -
Glsi02g2306 539 Gene3D - 69 530 IPR016167 -
Glsi02g2306 539 Pfam FAD binding domain 83 225 IPR006094 GO:0050660
Glsi02g2306 539 Gene3D - 260 489 IPR016170 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2306 Glsi-ChrGlsi02 73420652 73422744 Dispersed/Wgd