Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2285 ATGCAAGCGAATGAGAAATGTGATGTGTATAGCTTCGGAGTTCTAACTTTAGAAATCCTTATGGGAAAGCATCCAGGAGAATTTATTTCTTCTCTGACAGAGACCCAAACAGTCTATGATTTGCTATTGAAAGATGTGTTGGACTCACGGCTTCCTCAACCCACAAACTCAGTTGTTGAGGAAGTGATGTTGATTGCAAAAATAGCATTTGCTTGCTTGAATGAAAATCCATTTTCTCGCCCAACCATGGAGAAAGTATCTCTTGAGCTTGCGCGGCCAAATCATTTGATTTGTTATGACAACTTGCAACTGCGCTTAAGGATGCTGTATTCGGATGCTTTTTCCATAAATCTCATGGAACCATTGATTTTAAATTTTCTTTCTGGAGATAGTATACAAAGAAATATACAAGACATGGTTTCCGGGAAAACACAAGGTCCCTTTACACACGACCCCCTGGCCGAGACAGCTAGACAGCTTAAATAG 486 0.4012 MQANEKCDVYSFGVLTLEILMGKHPGEFISSLTETQTVYDLLLKDVLDSRLPQPTNSVVEEVMLIAKIAFACLNENPFSRPTMEKVSLELARPNHLICYDNLQLRLRMLYSDAFSINLMEPLILNFLSGDSIQRNIQDMVSGKTQGPFTHDPLAETARQLK 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2285 161 Gene3D Transferase(Phosphotransferase) domain 1 1 99 - -
Glsi02g2285 161 ProSiteProfiles Protein kinase domain profile. 1 97 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g2285 161 SUPERFAMILY Protein kinase-like (PK-like) 3 116 IPR011009 -
Glsi02g2285 161 Pfam Protein tyrosine and serine/threonine kinase 3 88 IPR001245 GO:0004672|GO:0006468
Glsi02g2285 161 PANTHER LEUCINE RICH REPEAT KINASE 2 1 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2285 Glsi-ChrGlsi02 73238399 73240669 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2285 5 92 Receptor kinase-like Gene Family AT1G16150 35.789 2.09e-11 59.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Glsi02g2285 PK_Tyr_Ser-Thr 4e-07 CL0016