Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2282 ATGGGTAGTAGAACTGTAATTGCTAAGACCGACAACGGTAACAAGATTGTGAAAGGGATGCCGAGCTACGCTCCTCCATTGCCTACTTCTAGTTCCATGGTAGAAGGAACTACTGTTCATCCTTCGCGAATATCTGAATTTGGAACCATTGAGCAATCTCTTGGATTTCGTGGGGAGGATGCTATCAACCTTAGCAGAAATCCAGTATTCAGTCAAATGAAGTCAAATAACCAACCTCTAGGTGTTGATATTCAATATGGGGCTTTAAATAAGACATTGCCACTACAAAAAGACTCACATTCAAATCTGGCTTCTACATCTGCTGGTCATCATGAAAACTGGGGGGAGTCCAACATGGCAGATGCAAGCCCAAGGACTGATACTTCAACAGATGATACAGATGATAAAAATCAAAGGTCCGAAAGGGGTCAAGCAGGTGTTGGAGCCTCTGATTCCAGTGATAGATCAAAAAATAAATTAGACCAGAAGACATTACGGCGGCTAGCTCAAAATCGTGAGGCTGCCAGAAAAAGCCGATTAAGGAAAAAGGCATATGTGCAGCAATTAGAGAGTAGCAGGCTGAAATTGACTCAACTGGAGCAGGAGCTCCAACGAGCCCGCCAGCAGGGCATATTTATTTCAAGCACAGGAGATCAGTCCCATTCAATGAGTGGAAATGGTGCAATGGCATTTGATGCAGACTATGCACGATGGATAGAAGAGCATAATAAGCAGATAAGTGAACTAAGGGCTGCAGTCAATTCTCATGCCGGAGATATTGAACTTCGTACAATTGTTGACAATGTGATGACCCACTTTGATGAGATTTTTAGGCTGAAAGGTGTTGCAGCAAAATCTGATGTCTTCCACATCCTGTCAGGAATGTGGAAAACCCCAGCTGAGAGGTGTTTCATGTGGATTGGAGGCTTCCGCTCTTCTGAGATTCTCAAGCTTCTTGTAACTCAATTGGAGCCTTTAACTGAGCAACAACTGATGGGCATCTACAGCTTGCAACAGTCATCCCAGCAGGCTGAAGATGCTTTGTCCCAAGGAATGGATGCATTGCAACAATCGCTGGCTGAGACATTGGCCAATGATGCATCCAGCTCATCAGGCTCATCAGGAAATGTGGCAAATTATATGGGTCAGATGGCTATGGCCATGGGAAAGCTTGGGACTCTTGAGGGGTTTCTTCGCCAGGCTGATAATCTGCGACAGCAAACATTACAACAAATGCTGCGGATTTTAACGACGAGGCAATCAGCTCGAGCTCTACTTGCAATAAGTGATTATTTCTCCCGGCTACGAGCCCTAAGTTCACTATGGCTTGCCCGGCCAAGGGAGTGA 1347 0.4514 MGSRTVIAKTDNGNKIVKGMPSYAPPLPTSSSMVEGTTVHPSRISEFGTIEQSLGFRGEDAINLSRNPVFSQMKSNNQPLGVDIQYGALNKTLPLQKDSHSNLASTSAGHHENWGESNMADASPRTDTSTDDTDDKNQRSERGQAGVGASDSSDRSKNKLDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGIFISSTGDQSHSMSGNGAMAFDADYARWIEEHNKQISELRAAVNSHAGDIELRTIVDNVMTHFDEIFRLKGVAAKSDVFHILSGMWKTPAERCFMWIGGFRSSEILKLLVTQLEPLTEQQLMGIYSLQQSSQQAEDALSQGMDALQQSLAETLANDASSSSGSSGNVANYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMLRILTTRQSARALLAISDYFSRLRALSSLWLARPRE 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2282 448 CDD bZIP_HBP1b-like 163 215 - -
Glsi02g2282 448 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 161 205 IPR004827 GO:0003700|GO:0006355
Glsi02g2282 448 ProSiteProfiles DOG1 domain profile. 228 445 IPR025422 GO:0006351|GO:0043565
Glsi02g2282 448 SUPERFAMILY Leucine zipper domain 163 206 IPR046347 GO:0003700|GO:0006355
Glsi02g2282 448 Coils Coil 182 209 - -
Glsi02g2282 448 Coils Coil 239 259 - -
Glsi02g2282 448 SMART brlzneu 159 222 IPR004827 GO:0003700|GO:0006355
Glsi02g2282 448 Pfam bZIP transcription factor 163 203 IPR004827 GO:0003700|GO:0006355
Glsi02g2282 448 Gene3D - 162 214 - -
Glsi02g2282 448 Pfam Seed dormancy control 245 320 IPR025422 GO:0006351|GO:0043565
Glsi02g2282 448 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 166 181 IPR004827 GO:0003700|GO:0006355
Glsi02g2282 448 MobiDBLite consensus disorder prediction 98 126 - -
Glsi02g2282 448 MobiDBLite consensus disorder prediction 127 141 - -
Glsi02g2282 448 FunFam BZIP family transcription factor 162 211 - -
Glsi02g2282 448 PANTHER TRANSCRIPTION FACTOR TGA9 108 448 - -
Glsi02g2282 448 MobiDBLite consensus disorder prediction 98 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2282 Glsi-ChrGlsi02 73216205 73221031 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2282 119 448 bZIP Transcription Factor Family AT3G12250 77.039 0.0 513
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Glsi02g2282 DOG1 9e-32 No_clan