Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2278 ATGGCTAACGACGACAGGCAGAAAGAATCCGATCTTTTCATGGATCAAAACGACGACGATGTCAACGAAGACATTGAATCAACTAAGTTTGACAATTGGAGTAGGAGTGGGAGTGGGAGTGGCAGCGATGATGAGGGTGATCACGATGCACCTCCTGAAGCCTTCTCTTCACACCAATGGCCCCAAAGTTACAGAGAGACTATTGATTCTTACACAATTGCTGCATCACCAAACCTTGGAGCGGTTCTACGAACACCAAGCTTGATATATCAAAGTTTTGTCAGTCGCTCAAAGAGTAACTTAGACCTAGACGGAAAGGCTCCTTTATTGTCTGATCACGAAAGCATTAATCAAGCTCAAAAGGCTGGATTGGATAGGACCTCATTCTTAAGAGCACCATCATCATGGTTGGAGAAAGCTTCATTGCAGAGGCAACTCACTGGAGAACTACCCATTGGTTATGGATGTAGCCTCACTCAAACAGTTTTCAATGGCATTAACGTGATGGCTGGGGTTGGCCTTCTGTCCACACCTTATACAGTGAAACAAGCTGGATGGGCGAGTTTGTTGGTGCTGTGTCTGTTTGCCCTCGTATGTTGTTATACGGCCACACTCATGAGATACTGCTTTGAAAGCAGAGAAGGAATCATGACATACCCAGATATTGGAGAGGCTGCCTTTGGAAGATACGGCCGTATTATTGTATCAATTATTTTGTACACTGAATTATATTCATATTGTGTGGAATTTATTATCTTGGAAGGAGATAACCTAACTAGGTTGTTTCCTGGGACATCCTTGGATTGGGGCGGGTTCCAGTTGGACTCCATGCACTTATTTGGAATTTTGACTGCACTTATTGTTCTCCCTACTGTTTGGTTGAGGGACCTTCGTGTAATCTCTTATCTTTCAGCTGGAGGGGTTGTTGCGACACTTTTGATTGTTGTCTGTGTATTTTTTGTTGGGACAACAAATGGTGTTGGATTTAATCACACTGGTCAACTGGTGAATTGGAGTGGCATTCCATTTGCTATTGGTATCTATGGGTTTTGCTACTCAGGACATTCAGTTTTTCCAAATATCTACCAGTCTATGGCTGACAAAACAAAATTTACCAAGGCATTAATAATATGTTTCCTTTTGTGTATCTTAATATATGGAGGTGTTGCCGTCATGGGATATCTCATGTTTGGGGAAGCCACTTTGTCTCAGATAACATTGAATATGCCACCACATGCCTTTGTTTCCAAAGTTGCATTATGGACAACATCTGCTTTTTCCTTAATAATGAACAAATATGCTTTACTGATGAACCCACTGGCGAGAAGTATAGAGGAGTTGCTACCTGATGGAATATCAGAAAGTTATTGGTGTTTCATTCTACTTAGATCAGCACTTGTTATATCTACAGTTTTTTGTGCTTTTCTGATTCCCTTCTTTGGGCTCGTGATGGCTTTAATTGGTTCTATTCTCAGTATACTGGTGGCAGTGATAATGCCAGCTTTATGTTTTCTGAAAATTGTGGGGGGAAAAGCTACAAAAACACAGGTTGCTCTGAGTGTGGGAATTGCTGTATTGGGAGTCGTTGGTGGAATGCTGGGAACATATTCTTCTGTGTCGAAATTATTGAAGAATTACTGA 1641 0.4156 MANDDRQKESDLFMDQNDDDVNEDIESTKFDNWSRSGSGSGSDDEGDHDAPPEAFSSHQWPQSYRETIDSYTIAASPNLGAVLRTPSLIYQSFVSRSKSNLDLDGKAPLLSDHESINQAQKAGLDRTSFLRAPSSWLEKASLQRQLTGELPIGYGCSLTQTVFNGINVMAGVGLLSTPYTVKQAGWASLLVLCLFALVCCYTATLMRYCFESREGIMTYPDIGEAAFGRYGRIIVSIILYTELYSYCVEFIILEGDNLTRLFPGTSLDWGGFQLDSMHLFGILTALIVLPTVWLRDLRVISYLSAGGVVATLLIVVCVFFVGTTNGVGFNHTGQLVNWSGIPFAIGIYGFCYSGHSVFPNIYQSMADKTKFTKALIICFLLCILIYGGVAVMGYLMFGEATLSQITLNMPPHAFVSKVALWTTSAFSLIMNKYALLMNPLARSIEELLPDGISESYWCFILLRSALVISTVFCAFLIPFFGLVMALIGSILSILVAVIMPALCFLKIVGGKATKTQVALSVGIAVLGVVGGMLGTYSSVSKLLKNY 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2278 546 MobiDBLite consensus disorder prediction 1 61 - -
Glsi02g2278 546 Gene3D Amino acid/polyamine transporter I 155 543 - -
Glsi02g2278 546 MobiDBLite consensus disorder prediction 1 15 - -
Glsi02g2278 546 PANTHER OS05G0424000 PROTEIN-RELATED 165 531 - -
Glsi02g2278 546 Pfam Transmembrane amino acid transporter protein 157 538 IPR013057 -
Glsi02g2278 546 FunFam Amino acid transporter AVT1A 154 545 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2278 Glsi-ChrGlsi02 73191024 73196264 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2278 3 481 Amino Acid or Auxin Permease AAAP Family AT2G41190 64.476 0.0 608