Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2270 ATGGTCAAGAAGCTTAACCACAATGCTAGCGAACGTGATCGCCGCAAGAAGATCAATACCCTCTATTCCTCACTTCGTTCACTGCTTCCCGTTGCACATCAAATGAAAAAAGTAAGCATTCCAGCAACAATTTCACTAGTCCTAAAATACATACCTGAGTTACAGCAGCAAGTGGAAGGACTAATTAAGAAAAAGGAGAAGCTTTTATTGAGAATTTCTCAGCAAGTAGGTGCAGCGAATAACAAAGAATCTCAACGGAGAATGGGGCATCACAACTCCGTTTGTGTTGTTTCAACTAATGGGCTCAGCGATAGTGAAGCTGTTGTTCAGATTTCCACTTACAAGGTCCACAAAATTCCGCTATCTGAGATCTTGCAGTGTTTAGAAAAAGATAACCTTTTACTGCTAAATGCTTCTTCCTTTGAAACCTTTGGAGGCAGGGTCTTCCATAACTTGCATTTCCAGGTCGAGAAATCCTTTAGATTAGAGTCCGAGATTCTAAGTGAGAAGCTTTTGTCAATATATGAGAAGGAAGATGTTTACTAA 546 0.4011 MVKKLNHNASERDRRKKINTLYSSLRSLLPVAHQMKKVSIPATISLVLKYIPELQQQVEGLIKKKEKLLLRISQQVGAANNKESQRRMGHHNSVCVVSTNGLSDSEAVVQISTYKVHKIPLSEILQCLEKDNLLLLNASSFETFGGRVFHNLHFQVEKSFRLESEILSEKLLSIYEKEDVY 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2270 181 Pfam Helix-loop-helix DNA-binding domain 3 55 IPR011598 GO:0046983
Glsi02g2270 181 Coils Coil 51 71 - -
Glsi02g2270 181 FunFam Transcription factor ORG2 1 87 - -
Glsi02g2270 181 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 3 75 IPR036638 GO:0046983
Glsi02g2270 181 SMART finulus 8 60 IPR011598 GO:0046983
Glsi02g2270 181 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 2 54 IPR011598 GO:0046983
Glsi02g2270 181 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 2 173 - -
Glsi02g2270 181 Gene3D - 1 89 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2270 Glsi-ChrGlsi02 73124173 73125121 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2270 1 177 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G56970 49.444 1.72e-51 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Glsi02g2270 HLH 1.8e-11 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g2270 02 73124173 73125121 Glsi02g2270 02 73124173 73125121 ECH