Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2262 ATGGGAATGGCCACAGAATCCCAATTTCATGTATTGGCCGTCGATGACAGCCTAATAGATAGGAAGCTGATTGAGAAGCTGCTCAGAACATCGTCGTATCAAGTTACTACAGTTGATTCTGGTAGCAAGGCTTTAGAGTTTCTGGGTTTGCGGGAGAATGAACTGAGCAACCCAAATACACCGTCTGTTTCTCCTAACAGCAATCAGGAAATGGAGGTGAATCTTGTGATTACTGACTACTGTATGCCTGGCATGACAGGCTATGATTTACTCAAGAAAATCAAGGAATCTTCGTCTTTGAGAAACATACCAGTGGTGATTATGTCATCTGAGAATGTGCCTTCAAGGATTAGCAGATGCTTGGAGGAAGGAGCAGAGGAATTTTTCTTGAAACCAGTGAGACTATCGGATTTGAATAGGCTTAGACCCCATATAATGAAGACCAAGTTGAAGGATAAAAAACAAGAACAAAATGAAAAGCTTGAAACCCCAGAAGTTCAACAAAACCCAAACGAGCAGCAGCAAGAACCACAATTACTAGTAGAACAACAACAACAACAATCACTACAACAAACCAACAATAGCAAGAGGAAGGCCATGGAACAGGGGCTTTCCCAAGACAGTGACAGAACAAGAACAAGACCAAGATACAGTGGCATAGCCACCATGGTCTGA 675 0.4237 MGMATESQFHVLAVDDSLIDRKLIEKLLRTSSYQVTTVDSGSKALEFLGLRENELSNPNTPSVSPNSNQEMEVNLVITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNRLRPHIMKTKLKDKKQEQNEKLETPEVQQNPNEQQQEPQLLVEQQQQQSLQQTNNSKRKAMEQGLSQDSDRTRTRPRYSGIATMV 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2262 224 CDD REC_typeA_ARR 11 141 - -
Glsi02g2262 224 Gene3D - 10 220 - -
Glsi02g2262 224 MobiDBLite consensus disorder prediction 147 224 - -
Glsi02g2262 224 MobiDBLite consensus disorder prediction 147 161 - -
Glsi02g2262 224 Pfam Response regulator receiver domain 11 138 IPR001789 GO:0000160
Glsi02g2262 224 SMART REC_2 9 142 IPR001789 GO:0000160
Glsi02g2262 224 ProSiteProfiles Response regulatory domain profile. 10 146 IPR001789 GO:0000160
Glsi02g2262 224 MobiDBLite consensus disorder prediction 162 201 - -
Glsi02g2262 224 SUPERFAMILY CheY-like 8 161 IPR011006 -
Glsi02g2262 224 PANTHER TWO-COMPONENT RESPONSE REGULATOR 9 198 IPR045279 GO:0009736
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2262 Glsi-ChrGlsi02 73044468 73045730 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2262 1 224 Response Regulator Gene Family AT3G57040 63.445 1.30e-97 282
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Glsi02g2262 Response_reg 9.6e-20 CL0304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g2262 02 73044468 73045730 Glsi02g2262 02 73044468 73045730 ECH