Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2232 ATGCCTTATCTTGTCCGAGATAAATTATTTATTGGTGATATTGGTGATGCAGCTGAGATCCTCCAAAATGGTAGTGCTGAAATCACGCATATTTTATCAGTTCTTAGCTCTGCTTCAATATCATTCTTTTCGGAATGGCGTAGTGGCCTAACGATCCCCACAAAGGAAATTAAGAAAGTTTATGTCGGAGGCGATCATGGTTCTGCTCCTGATGATGATTTGGGTGATGCCTCAAAGTGTCCCTTGTCACCAGAGAACCTCTTGTACCTGTTGGAATATGCAGGTAAAGATTTGAAGTTGGTGAGGATGGCTGTTCCCCTGAGAGATACAGAAAACGAAGATTTATTGGATTATTTGGATGTTTGCCTCAATTTTATTGATCTGAATATAAAAGATGGTTCTGTTCTGGTGCACTGCTTTGCTGGAGTATCAAGAAGTGCAGCAATCATTACAGGATATTTGATGAGAACTGAACATCTATCTCTAGAAGATGCCCTTCAATCATTAAGGAAGAGCTGTGAATTTGTTTGCCCCAATGATGGTTTTCTAGAGCAGTTAAAAATGTTTGAGGAGATGGGCTTCAAGATAGATCGGTCTAGCTCTATATACAGGTGCTTTCGTCTGAGAATACTGGGGGAGAATTATAACTCGGGGTTGAGGATAGACAGTTCTAAACTCAGGGCTGATCCTGGCTTGCTTGTCCAAGTTGCTTCAGAGGTGGAAGGAGTCCCAAGAGTAGGAAATAATTGTAGTCCTGCGTATCGCTGTAAGAAGTGCCGACGAGTGGTTGCATTGAAGGAACATGTTGTAGATCATGTTCCAGGCGAGGGTGAGACATCCAGTGGGTGGCACAAGTGGAGAAGTGACAGCCTTTTTAACAAGTCTAATGAATCCGAGTGTTCATCGATATTTGTTGAGCCACTTAGATGGATGAAAGCAGTTGAGGAAGGTGCATTGGAGGGTAAGTTGTCCTGTGCCCATTGTGACGCTCGTTTGGGAAATTTCAATTGGTCAGGCATACAATGTAGCTGTGGAAGCTGGATAACCCCAGCCTTTCAGATCCACAAATGCCGAGTGGATGTAAGCCCTGTTTAA 1095 0.4311 MPYLVRDKLFIGDIGDAAEILQNGSAEITHILSVLSSASISFFSEWRSGLTIPTKEIKKVYVGGDHGSAPDDDLGDASKCPLSPENLLYLLEYAGKDLKLVRMAVPLRDTENEDLLDYLDVCLNFIDLNIKDGSVLVHCFAGVSRSAAIITGYLMRTEHLSLEDALQSLRKSCEFVCPNDGFLEQLKMFEEMGFKIDRSSSIYRCFRLRILGENYNSGLRIDSSKLRADPGLLVQVASEVEGVPRVGNNCSPAYRCKKCRRVVALKEHVVDHVPGEGETSSGWHKWRSDSLFNKSNESECSSIFVEPLRWMKAVEEGALEGKLSCAHCDARLGNFNWSGIQCSCGSWITPAFQIHKCRVDVSPV 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2232 364 PIRSF DUSP12 3 45 IPR016278 GO:0006470|GO:0008138
Glsi02g2232 364 PIRSF DUSP12 92 364 IPR016278 GO:0006470|GO:0008138
Glsi02g2232 364 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE 12 FAMILY MEMBER 1 360 - -
Glsi02g2232 364 ProSiteProfiles Dual specificity protein phosphatase domain profile. 52 195 IPR020422 GO:0006470|GO:0008138
Glsi02g2232 364 Gene3D Protein tyrosine phosphatase superfamily 4 212 IPR029021 -
Glsi02g2232 364 FunFam Dual specificity protein phosphatase 12-like 4 212 - -
Glsi02g2232 364 CDD DSP_DUSP12 4 197 - -
Glsi02g2232 364 SMART dsp_5 1 192 IPR020422 GO:0006470|GO:0008138
Glsi02g2232 364 ProSitePatterns Tyrosine specific protein phosphatases active site. 137 147 IPR016130 GO:0016311|GO:0016791
Glsi02g2232 364 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 116 171 IPR000387 GO:0016311|GO:0016791
Glsi02g2232 364 Pfam Dual specificity phosphatase, catalytic domain 99 191 IPR000340 GO:0008138|GO:0016311
Glsi02g2232 364 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 4 195 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2232 Glsi-ChrGlsi02 72837620 72841882 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2232 100 191 Protein tyrosine phosphatase (PTP) family AT3G06110 38.710 5.75e-16 73.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g2232 02 72837620 72841882 Glsi02g2232 02 72837620 72841882 ECH