Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2222 ATGTGCTCAAGAGTAGAGTCTTCTTCAGAAGCTCATAACATCCAGAGTTTGCCTGGCCAACCCAATGTTACTTTCCGCCAATATGGGGGCTACGTACCCGTTGATGACAAGCAGCAGAGAGCTCTGTTTTACTACTTGGTTGAAGTAGAGACGGACTCTGCTTCCAAGCCTCTTGTTCTCTGGCTAAATGGAGGTCCCGGTTGTTCCTCAATCGGAATCGGAGCTTTGACTGAACACGGTCCTTTTATCACTAATTATGGCAAGGGTGAATTTAGTGATGCTGTAAGTAGTCACAGGTTGCTCTTAAAACTTACAGGCAAAGTTGCTGAGAGGAAATGCTGCGATTCTCACTCACCGGCGAAGGTCAAGCATTTCTCAGATTTTAAGGTCTATACATTTGCAAAAGGACAAGAACAGTTTGCAGGCGAGGAACTTGATGACTGTCCAGAGAAAAATGCAGAGATGTACTTCAACAAAAAAGATGTGCAGAAGGCTCTGCACACGAGGCTTGTTGGAGTCACCCAGTATCGTGTGGTGGTTTCGCATAATTATAGAGGAGAAGATGAAGAAATACCAACGATCAACATTGTGGGGTGGCTTGTTAAGTCTGGCCTTCGGGTATTTGTTTATAGTGGGGATCAAGACTCTGTCATTCCATTTATTGGTACTCGAAGATTGGTGGATAAAGCAGCAAAGAAACGAGAACTGAAAACAGGGTACAGAGACACACGAGGTCACAGGAAAAGCTACAGCATGCTCTGTCCCCAGTGCGGCAGGAGGCCCAGCCACAGCTCTTCAGATCTTACTATGGTAAACCTATCTCGGCCGTGTTCTATGGTTGCGGCAATATTAGTTGTTGTTGCACAAATATTTGGGGCAGTGAATTCACTTTCAGAAGTAGATAAGATAACCAGTTTGCCGGGGCAGCCGCCAGTCAAGTTCCAGCAGTATGCTGGTTACATTACCATCGATGACCAGCAGCAGAGAGCTCTGTTTTACTACTTTGCCGAAGCAGAAGTGGACTCAGCTTCCAAGCCACTGGTTCTCTGGTTGAATGGAGGTCCTGGTTGTTCGTCTGTTGGAGCTGGGGCTTTCGTTGAGCATGGCCCTTTCAAACCCAGTGAAAACGTTCTTATTAAAAATGATTATAGTTGGAACAAAGAGGCAAATATGCTCTATCTGGAATCACCAGCTGGAGTTGGTTTCTCTTACTCGGCCAATAAATCTTTCTATGACTTTGTGACCGATGAAATGACAGCAAGGGATAATCTTGTTTTCCTACAGCGTTGGTTTAATAAATTCCCACAATACAAAAACAACGATTTCTTTATCACAGGGGAGAGCTACGCAGGTCACTATGTTCCCGAACTTGCCCAACTCATTGTTCAAACCAAAACCAAGTTCAATCTCAAGGGAATAGCAATAGGGAATCCTCTTCTGGAATTCAATACTGATTTCAACTCAAGAGCGGAGTTTTTTTGGTCCCACGGACTAATATCAGATTCAACTTACGAAACCTACACTACAGTCTGCAACTACTCCCAAATCAGGAGACAAGTTCAAAGTGGGACACTTACTCCCGTATGTGCAGGTGTGAGTCAACTAGTATCAAGGGAGATTAGTAAATTTGTTGATACATATGATGTCACTCTTGATGTCTGTTTGTCAACAGTGAATCAACAGTCTCAGGTGCTGAACCAACTGCAAGAGACAGAGAAGATAGATGTTTGCGTGGAAGATGAAACAACTAATTACTTGAACAGGAAAGAAGTACAGGAAGCTCTTCATGCTAAGCTTGTAGGAGCCCCCAGATGGTCAGTTTGCAGCGAAATTCTCAAATATGACATGCAGAATCTGGAGATACCAACAATTCCTATCCTGGGGACACTTGTTAAGTCTGGCATCCGGGTTCTCGTATACAGTGGAGATCAAGATTCAGTCATCCCGTTAACTGGGACACGGATGCTGGTGAATGGACTGGCCAAGGAGTTCGGACTGAATACAACTGTGCCGTACAGAGCTTGGTTTGGAGGAAGACAGGTTGCCGGATGGACACAAGTATATGGTGACATCTTATCATTTGCCACCGTAAGGGGGGCAGCTCATGAAGCTCCGTTTTCACAGCCAGAGAGATCACTCGTGCTATTTAAGGCATTTTTGGAAGGAAAGCCACTTCCTGAAGTATTCCCTTCATAA 2196 0.4472 MCSRVESSSEAHNIQSLPGQPNVTFRQYGGYVPVDDKQQRALFYYLVEVETDSASKPLVLWLNGGPGCSSIGIGALTEHGPFITNYGKGEFSDAVSSHRLLLKLTGKVAERKCCDSHSPAKVKHFSDFKVYTFAKGQEQFAGEELDDCPEKNAEMYFNKKDVQKALHTRLVGVTQYRVVVSHNYRGEDEEIPTINIVGWLVKSGLRVFVYSGDQDSVIPFIGTRRLVDKAAKKRELKTGYRDTRGHRKSYSMLCPQCGRRPSHSSSDLTMVNLSRPCSMVAAILVVVAQIFGAVNSLSEVDKITSLPGQPPVKFQQYAGYITIDDQQQRALFYYFAEAEVDSASKPLVLWLNGGPGCSSVGAGAFVEHGPFKPSENVLIKNDYSWNKEANMLYLESPAGVGFSYSANKSFYDFVTDEMTARDNLVFLQRWFNKFPQYKNNDFFITGESYAGHYVPELAQLIVQTKTKFNLKGIAIGNPLLEFNTDFNSRAEFFWSHGLISDSTYETYTTVCNYSQIRRQVQSGTLTPVCAGVSQLVSREISKFVDTYDVTLDVCLSTVNQQSQVLNQLQETEKIDVCVEDETTNYLNRKEVQEALHAKLVGAPRWSVCSEILKYDMQNLEIPTIPILGTLVKSGIRVLVYSGDQDSVIPLTGTRMLVNGLAKEFGLNTTVPYRAWFGGRQVAGWTQVYGDILSFATVRGAAHEAPFSQPERSLVLFKAFLEGKPLPEVFPS 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2222 731 Gene3D - 577 612 - -
Glsi02g2222 731 Pfam Serine carboxypeptidase 307 722 IPR001563 GO:0004185|GO:0006508
Glsi02g2222 731 Pfam Serine carboxypeptidase 118 235 IPR001563 GO:0004185|GO:0006508
Glsi02g2222 731 Pfam Serine carboxypeptidase 19 86 IPR001563 GO:0004185|GO:0006508
Glsi02g2222 731 FunFam Carboxypeptidase 623 722 - -
Glsi02g2222 731 SUPERFAMILY alpha/beta-Hydrolases 10 88 IPR029058 -
Glsi02g2222 731 Gene3D - 623 722 - -
Glsi02g2222 731 SUPERFAMILY alpha/beta-Hydrolases 143 234 IPR029058 -
Glsi02g2222 731 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 14 83 IPR001563 GO:0004185|GO:0006508
Glsi02g2222 731 FunFam Carboxypeptidase 296 726 - -
Glsi02g2222 731 SUPERFAMILY alpha/beta-Hydrolases 303 726 IPR029058 -
Glsi02g2222 731 Gene3D alpha/beta hydrolase 101 251 IPR029058 -
Glsi02g2222 731 ProSitePatterns Serine carboxypeptidases, serine active site. 444 451 IPR018202 GO:0004185
Glsi02g2222 731 Gene3D alpha/beta hydrolase 298 556 IPR029058 -
Glsi02g2222 731 Gene3D alpha/beta hydrolase 8 99 IPR029058 -
Glsi02g2222 731 PRINTS Carboxypeptidase C serine protease (S10) family signature 381 393 IPR001563 GO:0004185|GO:0006508
Glsi02g2222 731 PRINTS Carboxypeptidase C serine protease (S10) family signature 430 455 IPR001563 GO:0004185|GO:0006508
Glsi02g2222 731 PRINTS Carboxypeptidase C serine protease (S10) family signature 394 404 IPR001563 GO:0004185|GO:0006508
Glsi02g2222 731 PRINTS Carboxypeptidase C serine protease (S10) family signature 692 705 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2222 Glsi-ChrGlsi02 72773130 72779741 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2222 585 725 Calmodulin-binding Proteins AT2G22960 29.078 7.64e-16 74.7