Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2220 ATGGGAAGATTGAGATTGAGTGCAGAACGAAGGTGCGGTCGGATTCTCACGCCTTTTGGATTGGGCCCACAGATGAAGTCCTTGTCTCCAAACAGGATACCCACTTTGGACCTCTTTCCCACCGATGATGGAAATGGGTGTGAAGTGGTGGAATATGAATGGGTGGAAAAGGAGTTGAGGCCACGTCCGTTCTCAAATCACGCCGCCGAGTTTTTAGCTCTTTCTCTGTTCCCTCTGTGTGGTAATCTCTGCACTATGCTATCTCGGCCGTGGATCTTTATGGGCACAATCTGTGCTATTTTTCTATTAACATGTTCGATTGTGGAGCCTTATCCAATACACGATAAGATCCAAAGCTTGCCCGGGCAGCCGTCTGTGACTTTTCAACAATTTGCAGGCTACATAATCGTAGATGAGAAGCAACAGAGATCTCTGTTTTACTACTTTGTTGAAGCAGAAGCAAACCCAGCTCATAAGCCTCTTGTTCTCTGGCTAAACGGAGGTCCTGGTTGTTCTTCTCTTGCCGGAGGGTTCTTTGAACATGGTCCCTTTAGAGCTACCACAAAGGGTCTTGTGAAAAATATGTACAGCTGGAACAAAGAAGCCAACATGTTGTACTTGGAAGCCCCAGCAGGTGTTGGATTCTCTTATTCTGTCAACAAGTCGTTCTATGGATCCTTGAACGATGAGATCACAGCTCGAGACAATTTGGCATTCCTGCAACGCTGGTTTGTCAAGTTTCCAGAGTACAAGAACAGAGACTTCTACATAACCGGAGAGAGCTATGGAGGACACTACGTGCCAACCCTTGCACAGCTTATTATTGAGAGCAAAGCGATCCCCAACCTAAAGGGTATTGCGATAGGAAATCCTTTGCTGGATTTCGACAATGATTTTAATGCGAGGGTTGATTTCTATTGGTCGCACGGGTTGATATCTGATTACACTTATAAGACTATGAACAGTGTGTGTAACGGTTCGCAGTTCATGAGACAACTCTTTAGTGGAGACTTCTCTGACACTTGCCTTGAACTATATGCTCCAGTACTTTCTCAGCCAATAGACATTGATTATGTTATCGGCGACAGGTGTAGATCTTCTAATTTATCCACCACAAGCATTCTCAATCTGCCGGCATCATCAAGATTTCAGGTCTTAATGTCTCGGCTTTTGCAGCAAGATGAAATCAGTGGCCAGGGAGATGAGAATGCCTGTGCACAAGTAGTGACAGCCAAGTACTTGAACAGGAAAGATGTGCAGAAAGCTCTGCATGCACGGCTTGTTGGAGTAAAGGAATGGGACATCTGCAATGAGTTCATCAATACAAAATATGCTTTTGCAAGCAAGCAAGCTGCAACAATTAAGGTAGTAGGCTCGCTTATCAGGTCTGGCATACGGGTGGTAGTTTACAGTGGAGACCTGGATTCTAACATTCCATTCATCGGTACTCGACGTTTGGTGAGTGAGCTAGCCAAACAATTGAAACTGAAAGTAACATTGCCATACACAGCCTGGTTCGTGGGGAAAACGGTTGGAGGATGGACGGAAGTTTATGGAAAAGGGCTGTCGTATTCTGTCATAAGGGGCGCTTCCCATGAAGCTCCGGCTACTCAACCGAAGAGGGCTCTGCTCTTGTTTAGTGCTTTTCTTAAAGGAAAACCACTTCCTGTTCCCAAACACTGA 1683 0.4545 MGRLRLSAERRCGRILTPFGLGPQMKSLSPNRIPTLDLFPTDDGNGCEVVEYEWVEKELRPRPFSNHAAEFLALSLFPLCGNLCTMLSRPWIFMGTICAIFLLTCSIVEPYPIHDKIQSLPGQPSVTFQQFAGYIIVDEKQQRSLFYYFVEAEANPAHKPLVLWLNGGPGCSSLAGGFFEHGPFRATTKGLVKNMYSWNKEANMLYLEAPAGVGFSYSVNKSFYGSLNDEITARDNLAFLQRWFVKFPEYKNRDFYITGESYGGHYVPTLAQLIIESKAIPNLKGIAIGNPLLDFDNDFNARVDFYWSHGLISDYTYKTMNSVCNGSQFMRQLFSGDFSDTCLELYAPVLSQPIDIDYVIGDRCRSSNLSTTSILNLPASSRFQVLMSRLLQQDEISGQGDENACAQVVTAKYLNRKDVQKALHARLVGVKEWDICNEFINTKYAFASKQAATIKVVGSLIRSGIRVVVYSGDLDSNIPFIGTRRLVSELAKQLKLKVTLPYTAWFVGKTVGGWTEVYGKGLSYSVIRGASHEAPATQPKRALLLFSAFLKGKPLPVPKH 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2220 560 ProSitePatterns Serine carboxypeptidases, histidine active site. 522 539 IPR033124 GO:0004185
Glsi02g2220 560 SUPERFAMILY alpha/beta-Hydrolases 117 556 IPR029058 -
Glsi02g2220 560 Gene3D alpha/beta hydrolase 111 556 IPR029058 -
Glsi02g2220 560 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 115 539 IPR001563 GO:0004185|GO:0006508
Glsi02g2220 560 Pfam Serine carboxypeptidase 122 552 IPR001563 GO:0004185|GO:0006508
Glsi02g2220 560 ProSitePatterns Serine carboxypeptidases, serine active site. 257 264 IPR018202 GO:0004185
Glsi02g2220 560 FunFam Carboxypeptidase 110 556 - -
Glsi02g2220 560 PRINTS Carboxypeptidase C serine protease (S10) family signature 207 217 IPR001563 GO:0004185|GO:0006508
Glsi02g2220 560 PRINTS Carboxypeptidase C serine protease (S10) family signature 194 206 IPR001563 GO:0004185|GO:0006508
Glsi02g2220 560 PRINTS Carboxypeptidase C serine protease (S10) family signature 243 268 IPR001563 GO:0004185|GO:0006508
Glsi02g2220 560 PRINTS Carboxypeptidase C serine protease (S10) family signature 522 535 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2220 Glsi-ChrGlsi02 72758677 72763210 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2220 411 555 Calmodulin-binding Proteins AT2G22960 26.027 6.26e-12 62.8