Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2217 ATGCCGAGTGCCAACTGGCACTACCTCACATCACACCCTCCCACTTCTGCTTATAAAAGGAGAAGCCATTGCCACTTCTCTGCACATACCAGCTCTTTTTTAAAGTCTTATTCTATAGACTCTCTTCAACCTTGTTCCTATCCTTTGCTCTTAGATTTCAGTCAACCTTCTATCCTTAGACCATTCTCTAGTGATTCTCAAACCACAAATACATTTACCACTAAAAAAATGGCATCCAGCTCAATGTCATCCTCTGGCTCATGGACTGCCAAGGACAACAAAGCCTTTGAAAGGGCTTTAGCAATTTATGACAAGGACACCCCTGATCGTTGGTCCAATGTTGCCAAGGCTGTCGGAGGGAAAACTCCAGAAGAAGTGAAGAGGCACTATGAGCTCCTCGTGCAGGACGTTCAGCATATAGAATCAGGGCAAGTGCCCTTCCCCAAGTACAAGAAAAGTGGAGGGTCTGGTGAGGAAAAAAGTTAG 486 0.4506 MPSANWHYLTSHPPTSAYKRRSHCHFSAHTSSFLKSYSIDSLQPCSYPLLLDFSQPSILRPFSSDSQTTNTFTTKKMASSSMSSSGSWTAKDNKAFERALAIYDKDTPDRWSNVAKAVGGKTPEEVKRHYELLVQDVQHIESGQVPFPKYKKSGGSGEEKS 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2217 161 SUPERFAMILY Homeodomain-like 87 141 IPR009057 -
Glsi02g2217 161 Gene3D - 78 147 - -
Glsi02g2217 161 ProSiteProfiles SANT domain profile. 83 137 IPR017884 -
Glsi02g2217 161 ProSiteProfiles Myb-like domain profile. 80 134 IPR001005 -
Glsi02g2217 161 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 77 157 IPR044636 GO:0003700
Glsi02g2217 161 FunFam Transcription factor SRM1 80 147 - -
Glsi02g2217 161 SMART sant 84 136 IPR001005 -
Glsi02g2217 161 Pfam Myb-like DNA-binding domain 86 130 IPR001005 -
Glsi02g2217 161 CDD SANT 88 134 IPR001005 -
Glsi02g2217 161 MobiDBLite consensus disorder prediction 64 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2217 Glsi-ChrGlsi02 72741955 72742440 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Glsi02g2217 Myb_DNA-binding 7.6e-07 CL0123