Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2207 ATGAGGGAGGAGGACTCGAATTGGTTCTCGCGATGGGAAGAGGAACTCCCTTCTCCAGAGGAACTCATGCCCCTCTCCCAAACCCTAATCACTCCTGATCTTGCTATGGCTTTCGACATCCGAAATTCCCATGGCAATAGCCCACAACAAGCTCCTCAACCCCCACCTCCTTCAAATCCTTTGCCTTCTTCTGGGAATCCTACCCAGCACAACTCAGCTGACTTTGCTGATTCCGCTGAGTTGGGTTCTGGGACTGGGGGTGAGGAACCCGCCCGCACCCTCAAGAGGCCTCGCCTCGTTTGGACTCCCCAACTTCACAAAAGGTTTGTGGATGCTGTGGCTCACTTGGGGATAAAAAATGCTGTGCCCAAGACCATAATGCAGCTGATGAGTGTGGATGGGTTGACCAGGGAAAACGTTGCTAGCCATTTGCAGAAATACCGGCTTTATCTGAAGCGCATGCAAGGAATATCGAGCGGCAGCAGTGGTGGTGGCGGCAGTGGTGGCGGAGGAGGAGGAGGAGGTGGATTGGCTGCTTCCGCTGATCCTGCCACTGACCATTTATTTGCTAGCTCACCCATGCCACCCCATTTCTTGCCGTTTGTGCCGGTCCCGGCTCTGCAGCACCACCATCACCAGCAGCACATGGCGGCAGCTGCAGCTGTGGCCGCCCATCCCCAGTTGCAGCCACAGTATCACAGACAGATGGGGCATTTTGGATCACCACCAAATGGGCACTTTGAACATCCGTTTCTGGCAAGGCAGTCTCAACCGCTTCATAGGATGGGAGGACCAATGCACAATCCAGCACCTGCTGGTTATGCAGAGGACTTGGAATCAGCTAACGCAGCAGGAGGGAGAAAGGTTCTTACATTATTTCCAACTGGGGATGATTGA 897 0.5418 MREEDSNWFSRWEEELPSPEELMPLSQTLITPDLAMAFDIRNSHGNSPQQAPQPPPPSNPLPSSGNPTQHNSADFADSAELGSGTGGEEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGISSGSSGGGGSGGGGGGGGGLAASADPATDHLFASSPMPPHFLPFVPVPALQHHHHQQHMAAAAAVAAHPQLQPQYHRQMGHFGSPPNGHFEHPFLARQSQPLHRMGGPMHNPAPAGYAEDLESANAAGGRKVLTLFPTGDD 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2207 298 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 3 256 IPR044841 GO:0003700|GO:0006355
Glsi02g2207 298 MobiDBLite consensus disorder prediction 1 95 - -
Glsi02g2207 298 MobiDBLite consensus disorder prediction 49 63 - -
Glsi02g2207 298 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 101 152 IPR017930 -
Glsi02g2207 298 SUPERFAMILY Homeodomain-like 93 153 IPR009057 -
Glsi02g2207 298 MobiDBLite consensus disorder prediction 159 179 - -
Glsi02g2207 298 MobiDBLite consensus disorder prediction 1 18 - -
Glsi02g2207 298 FunFam Two-component response regulator 92 155 - -
Glsi02g2207 298 NCBIfam myb-like DNA-binding domain, SHAQKYF class 97 149 IPR006447 GO:0003677
Glsi02g2207 298 MobiDBLite consensus disorder prediction 64 78 - -
Glsi02g2207 298 Gene3D - 93 155 - -
Glsi02g2207 298 Pfam Myb-like DNA-binding domain 100 148 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2207 Glsi-ChrGlsi02 72659633 72660529 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2207 1 298 G2-like Transcription Factor Family AT3G10760 57.022 7.63e-92 274
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Glsi02g2207 Myb_DNA-binding 2.2e-08 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g2207 02 72659633 72660529 Glsi02g2207 02 72659633 72660529 ECH