LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Glsi02g2205	ATGCCCGAACCAGAGCTCACGGAACAGCCTCCACCCTCCGATCTGACCTTCAGTGATTTATCATCCGAGTTCGATAACCTCCCTATCCCATCCATGGATCCCCTCTTTTTCTCGGACAACAACCACACCATGCCCTCTGACGCATTCGCATCGGATCTGGATCTCGCAATGGAATTCGGAGATAATGGCGATTTCGAGATTACCTTTGACGATCTTGATAATCTCTGTATTCCCTCCGAAGCCGACGACTTTCTACTCCCCGAAGGCTGTGTTCTACTGCCTGAATCGCCTCCCCTCGAGATGAATGACGATGACAAGCAGCTGAGTTCTAATAGTACCAATTTTGAGTCTCCAGAATCGGATACTTCTTCTGGTTCGAGCAATCGGAATTCCGATGTGGCTAGGTTTCTAAATTCGCAGTCATCCGAGTCTCGTAGTTACAAGCGGGACCTCTCTGTGACACATTCTTTGGATAATTCAGGTGATCGGAATTCGCATAACTCACTGGACGTTAAGGTTTCGAGCTCTCAATTGCCACAGTCTGATTCTTGCGACAGGGAGTCTTCGGGCGGACCTGTTTCATCTCAGGGTTCGGGCAATGGTAGGTCAGGCGACTCATGTGTTTATGAAGTGACGAATTCACCTTCACCGGATTCTGACCGTTACGACAGAGACATTTCTTCTCATGGGATTGCTGATCAGAATATAAAATTGGAGGAAATTGGTAAAAGTTGTGATTTGAAAAGGAAGAAGCAACTCAACGAAGGAAATACTGAGGCGAGGACTTGGAAGTACCGGAGATCGTCAGTACCTATGGAAAATACGGAGCAGCATTCTTGTCTCAATGCCATCAACGAAGAGGACGAGAAAAAGAAGGCTAGGTTGATGAGGAATCGGGAAAGTGCCCAGCTCTCTAGGCAGAGAAAGAAGCATTATGTGGAGGAGCTTGAGGAGAAGGTGAGGTCAATGCATTCTACCATAACTGATTTGAGTAGTAAGGTATCGTTTGTCATGGCTGAGAATGCTACTTTGAGACAGCAGTTGAGTGCTGGTGGAATGTGCCCCGCACCAGCTCCAGGGATGTATCCCCATCCCGCTATGGCACCCATGACTTATCCATGGATGCCGTGTGCTCCCTATGTTGTCAAGCCGCAAGGGTCTCAGATTCCTTTGGTTCCAATTCCTAGATTAAAGTCTCAGCGACCACTGTCTGCCTCGAAGACCAAAAAGTCCGAGAATAAGAAGACTGAGAGCAAAACTAAGAAGGTTGCCAGCATTAGTTTCCTGGGTTTGTTTTTCTTTATATTTCTTTTTGGTGGACTCGTTCCTCTAGTCAACGTTAACTTTGGAGGTTTAGTGGACAATGTTCCTGGTAGGTCCGCATCTGTTACTGATAGGTTCTATGGTCTGCCAGGAGAAAAAGTTTGGCGGGTAATTAGTCATAGGAATAGATCTGAAGGAGATAAGGGAGTAGCATTTTCTACTGGAAAATTTGGTATTTCTGACAGAATAATTTATGAAAAAGGCCTCAAACTAGGAGAAGAAACACGTAAACAGCGAGAGGCACCGCATAGAACAGGCTCAGATGAATTTGTTCAAGGGGGCAATGCTAGTGAGCCTCTTCTTGCTTCTCTCTATGTTCCAAGGAATGATAAGCTTGTGAAAATTGATGGGAACTTGATAATCCATTCCGTCCTGGCCACCGAGAAAGCTATGGCATCACAAACTGCTCATCCGAAGAAGGATCGTAGAGAAACTGGTTTGGCCATTTCTAAAGACTGGGACTCTGCGTTGGCTATTCCTGAAGTTGGAAGCAACAGAGGTCGACATCCTCACGTATACAGGAGTCCTCCTGAACAGCGGAAGGCTCTTGCCTCTGGTTCAGCTGAAACTTTGAAGGACGATCTAAAGTCAACTGCAACTGATGGTAAACTGCAACAGTGGTTCCGTGAAGGCCTTGCAGGGCCAATGTTAAGTTCTGGCATGTGCACGGAAGTTTTCCAGTTTGATGCCTCAACTCCAGGAGCTATAGTTCCAGCATCACCAGTTGCCAATGTTTCTGCACATAACCGCCAGAATGATACTCGTGTCAACAAGAGTAGGAATAGAAGAATCCTTCATCAGCTTCCAGATTCTCATGCCAGATCCAGTCTCAACATAACTGAAGAACATGTGGAAAGAAATTCGCAGAATGATGACTTCCATGGTAATAAATCAATGTCTTCCATGGTGGTTTCGGTTCTTGTTGATCCCAAAGAGGTGGGAGATGGTGATGTGGATGGCATGATAAAACCAAAATCACTTTCAAGGATTTTTGTGGTTGTGCTTATAGATAGCGTCAAGTATGTCACTTACTCGTGTGGTCTTCCGCGCGCCTCTCCTCATCTGGTGACTGCTTAA	2400	0.4604	MPEPELTEQPPPSDLTFSDLSSEFDNLPIPSMDPLFFSDNNHTMPSDAFASDLDLAMEFGDNGDFEITFDDLDNLCIPSEADDFLLPEGCVLLPESPPLEMNDDDKQLSSNSTNFESPESDTSSGSSNRNSDVARFLNSQSSESRSYKRDLSVTHSLDNSGDRNSHNSLDVKVSSSQLPQSDSCDRESSGGPVSSQGSGNGRSGDSCVYEVTNSPSPDSDRYDRDISSHGIADQNIKLEEIGKSCDLKRKKQLNEGNTEARTWKYRRSSVPMENTEQHSCLNAINEEDEKKKARLMRNRESAQLSRQRKKHYVEELEEKVRSMHSTITDLSSKVSFVMAENATLRQQLSAGGMCPAPAPGMYPHPAMAPMTYPWMPCAPYVVKPQGSQIPLVPIPRLKSQRPLSASKTKKSENKKTESKTKKVASISFLGLFFFIFLFGGLVPLVNVNFGGLVDNVPGRSASVTDRFYGLPGEKVWRVISHRNRSEGDKGVAFSTGKFGISDRIIYEKGLKLGEETRKQREAPHRTGSDEFVQGGNASEPLLASLYVPRNDKLVKIDGNLIIHSVLATEKAMASQTAHPKKDRRETGLAISKDWDSALAIPEVGSNRGRHPHVYRSPPEQRKALASGSAETLKDDLKSTATDGKLQQWFREGLAGPMLSSGMCTEVFQFDASTPGAIVPASPVANVSAHNRQNDTRVNKSRNRRILHQLPDSHARSSLNITEEHVERNSQNDDFHGNKSMSSMVVSVLVDPKEVGDGDVDGMIKPKSLSRIFVVVLIDSVKYVTYSCGLPRASPHLVTA	799

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Glsi02g2205	799	MobiDBLite	consensus disorder prediction	95	228	-	-
	Glsi02g2205	799	ProSiteProfiles	Basic-leucine zipper (bZIP) domain profile.	288	351	IPR004827	GO:0003700\|GO:0006355
	Glsi02g2205	799	MobiDBLite	consensus disorder prediction	602	632	-	-
	Glsi02g2205	799	FunFam	bZIP transcription factor 49	289	351	-	-
	Glsi02g2205	799	MobiDBLite	consensus disorder prediction	103	147	-	-
	Glsi02g2205	799	MobiDBLite	consensus disorder prediction	1	24	-	-
	Glsi02g2205	799	SMART	brlzneu	286	350	IPR004827	GO:0003700\|GO:0006355
	Glsi02g2205	799	MobiDBLite	consensus disorder prediction	157	216	-	-
	Glsi02g2205	799	PANTHER	BASIC-LEUCINE ZIPPER TRANSCRIPTION FACTOR F-RELATED	60	796	-	-
	Glsi02g2205	799	Pfam	bZIP transcription factor	287	348	IPR004827	GO:0003700\|GO:0006355
	Glsi02g2205	799	Gene3D	-	288	353	-	-
	Glsi02g2205	799	Coils	Coil	285	305	-	-
	Glsi02g2205	799	Coils	Coil	313	333	-	-
	Glsi02g2205	799	CDD	bZIP_HY5-like	291	342	-	-
	Glsi02g2205	799	SUPERFAMILY	Leucine zipper domain	290	348	IPR046347	GO:0003700\|GO:0006355

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Glsi02g2205	Glsi-ChrGlsi02	72646593	72650919	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Glsi02g2205	10	798	bZIP Transcription Factor Family	AT2G40950	48.451	0.0	535

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	bZIP	Glsi02g2205		bZIP_1	2.3e-11	CL0018