Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2204 ATGATTATAGCAAATGTAAAAGAAGAAACAACATTCATCGACCACAATAAAGTGGTCACATCTGGTATTGGCAAGCACAGTGGTGACATATCATCTCTCTTACCTTTTAACAATTCAATGACGCCAAATCCACAAGCAATGCTTTCTGCTTCAACAGGTATAAAGACATCCCACCTTATCACTACACCTGACCTCTCTTCTAAGTGCACACCCATGGATCTCTTCTCTGCGTTATCTTTCCTTCTCTTCTTCCTTCTCTTTCTCTATCTCTTCCTCCTATTTCTCACTTCCACCCAAAAATCCTCCAAAAATGGCTTCAAAGTCTACCCTTTAGTTGGAACTTTACCGGATTTCTTGAAGAACCGCCACCGCTTCCTGGATTGGTCCACCGAAGTCCTCCGTGACTGCCCCACCAACACCGCTGTCTTCGCTCGTCCTGGCAAAGTCCGAGGCATCATTACAGCAAATCCAGACAACGTAGAGCATATGCTGAAGACCAACTTCGACAACTACCCCAAAGGCGATCGGTTCATTAGCCTTCTCGAAGATTTCCTCGGCAGAGGGATATTCAACTCCGACGGCGAGCTCTGGAAAGTTCAGAGAAAAACCGCAAGCTATGAATTCAACACTAAGTCACTCCGAAACTTTGTCATGGATAATATGACCGTCGAAATTAAGACGAGGCTGCTTCCGATTCTCTCAAGAGCCTCCCAGACCCACCGGGTTCTGGATTTGCAGGACATCTTGGAGCGGTTCGCTTTCGACAACGTTTGCAAGCTCGCTTTCAACGTCGACCCCGGATGCCTCGGCGGCGACGGAACTACAGGAGCAGAGTTCATGCGGGCGTTTGAAGACGCCACCACTCTGAGCTCCGGGAGGTTCATGTATGCCCTTCCGCTGTTGTGGAAAATCAAGAGGTGGTTGAACTCAGGAACAGAGCGAAGGCTGAGAGAATCAATTGCAACCGTACATGAGTTCGCGGATGAGATCATAAGGTCGAGAATGGAAGCGAAGGAAGCAAAGCAGGACGTGGACTTATTGTCTCGGTTTATCGGAACGGAAGAGAGCTCCCCCGAGTTTCTGCGAGATATCGTGATAAGCTTCATTCTAGCAGGGCGTGACACAACGTCGTCTGCTTTGAGTTGGTTCTTCTGGATATTATGTTCAAGACCAGACGTGAAGCGAGAAATAAGGGAGGAACTGAAAGCAATTCGATCCCGGAACGGGAAAAACATAGGCGATGCCTGGGAGTACGAGGACCTGAAAGAAATGCAGTATCTGCAAGCAGCAATGTCGGAAACAATGAGGTTGTACCCACCCGTACCTGTGGATACGAAAGCATGTTTGAGCAACGACGTGTTACCTGATGGTACGAAGATTGAGAAGAATTGGTTCATATCGTACCATACGTACGCCATGGGAAGGATGGAGAGTGTGTGGGGTAAGGATTGCTGTGAATTCAAGCCAGAAAGGTGGATTGAGAATGGGACGTACAAAGGGGAGAGCCCGTTTCGATATCCGGTGTTCCATGCGGGTCCCAGATTGTGTCTGGGCAAAGATTTAGCCTATATTCAGATGAAGTACATAGCTGCTTCTGTAATGGAGTTGTTTGAGATAGACGCACAGGATAAGGTAAAGTGTCCTGAGCAACTGTTATCTTTGACTCTGAGGATGAAAGGAGGGTTCCCTGTCACCGTAAGCCAAAGGGATCTTAAATCTCGTGACTCTTGGCCGCACGACAATGCGTACGGCCAGGGAAAATAA 1764 0.479 MIIANVKEETTFIDHNKVVTSGIGKHSGDISSLLPFNNSMTPNPQAMLSASTGIKTSHLITTPDLSSKCTPMDLFSALSFLLFFLLFLYLFLLFLTSTQKSSKNGFKVYPLVGTLPDFLKNRHRFLDWSTEVLRDCPTNTAVFARPGKVRGIITANPDNVEHMLKTNFDNYPKGDRFISLLEDFLGRGIFNSDGELWKVQRKTASYEFNTKSLRNFVMDNMTVEIKTRLLPILSRASQTHRVLDLQDILERFAFDNVCKLAFNVDPGCLGGDGTTGAEFMRAFEDATTLSSGRFMYALPLLWKIKRWLNSGTERRLRESIATVHEFADEIIRSRMEAKEAKQDVDLLSRFIGTEESSPEFLRDIVISFILAGRDTTSSALSWFFWILCSRPDVKREIREELKAIRSRNGKNIGDAWEYEDLKEMQYLQAAMSETMRLYPPVPVDTKACLSNDVLPDGTKIEKNWFISYHTYAMGRMESVWGKDCCEFKPERWIENGTYKGESPFRYPVFHAGPRLCLGKDLAYIQMKYIAASVMELFEIDAQDKVKCPEQLLSLTLRMKGGFPVTVSQRDLKSRDSWPHDNAYGQGK 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2204 587 CDD CYP86A 140 562 - -
Glsi02g2204 587 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 509 518 IPR017972 GO:0005506|GO:0016705
Glsi02g2204 587 PANTHER CYTOCHROME P450 91 564 - -
Glsi02g2204 587 Pfam Cytochrome P450 107 550 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g2204 587 Gene3D Cytochrome P450 96 572 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g2204 587 FunFam Cytochrome P450 97 572 - -
Glsi02g2204 587 SUPERFAMILY Cytochrome P450 105 569 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g2204 587 PRINTS P450 superfamily signature 371 388 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g2204 587 PRINTS P450 superfamily signature 429 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g2204 587 PRINTS P450 superfamily signature 507 516 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g2204 587 PRINTS P450 superfamily signature 516 527 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g2204 587 PRINTS E-class P450 group I signature 506 516 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g2204 587 PRINTS E-class P450 group I signature 516 539 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g2204 587 PRINTS E-class P450 group I signature 428 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g2204 587 PRINTS E-class P450 group I signature 380 406 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g2204 587 PRINTS E-class P450 group I signature 360 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2204 Glsi-ChrGlsi02 72635603 72645041 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2204 101 569 Cytochrome P450 AT3G56630 63.214 0.0 635