Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2203 ATGCAGCTTTTCTCTGCTTTGCTCTTCTTCTTCCTCTTCTTTCTCTATATTTACCTTCGATTTCTCAATTCCGCCCCCAAATCCGTTAAAAAGGGCTTCAAAAACTATCCTTTCATTGGAGCTTTACCGGATTTCGTCAAGAACCGCCGGCGATTTTTGGACTGGACCACCCAAGTCCTCCGCGACTGCCCCACCAACACCGCTCTCATTGTTGGTCCTGGCAATTTCTTAGATATCTTTACAGCAAACCCCGATAATGTAGAGCATATTCTCAAGACCAAGTTTGAGAACTACCCCAAAGGCCACCGAATGACTAGCATTGTCGAAGATTTCCTTGGCAGAGGAATCTTCAACGCAGACGGCAAACTCTGGAAAGTTCAGAGGAAAACCGCAAGCTACGAATTCAACTCCAAATCGCTCCGAAACTTTGTCATGGATAATGTCACGGTCGAAATTCAAACGAGGCTGCTTCCGATTCTCTCAAGAGCTTCCGAGACCCACCGGGTTCTGGATTTGCAGGACATCTTGGAGCGTTTCGCTTTCAACAACATTTGCAAGCTCGCTTTCAACGTCAACCCCGGATATCTCGGCGGCGACGGAACCACCGGAGCAGAGTTCATGCGGACGTTTGATGACGCCAACATTCTGAGCTTCGGGAGGTTCATGTACGCCTTCCCACTGCTAATAACAATCAAGAAGTGGTTGAACGTTGGAACAGAGCGGAAGCTGAGAAAATCAATCGCAATCATACATGAGTTCGCGGATGAGATCATAAGGTCAAGAATGGAAGCGAAGGAAGCAAAGCGGGACGAGGACTTATTGTCGCGGTTTATAGGAACGGAAGATAGTTCCCCCGAGTTTCTGCGAGATATTGTAATAAGCTTCATTTTCGCAGGGCGTGACACGACGTCGTCTGGGCTTAGTTGGTTCTTCTGGATAGTATCTTCAAGACCAGACGTGAAGCAAGAAATAAGGAAGGAGCTGGAATCGATTCGTTCCCGCAACGGTAGAAACATAGGCGATGCGTTTGGGTACGAGGACCTGAAAGAAATGCAGTATCTGCAAGCAGCAATATCGGAAGCAATGAGGTTGTACCCGCCCATACCATTGGATACGAGAGTATGTTTGAGCCACGATGTGCTGCCTGATGGTACGATGATTAAGAAGGATTGGTTCATAACGTACCATACGTACGCCATGGGAAGGATGGAGAGTGTGTGGGGGAAGGATTGGTGTGAATTTAAGCCAGAAAGGTGGATTGAGAATGGGATGTACAAAGGGGAGAACCCGTTTCGATATCCGGTGTTCCATGCGGGTCCCAGATTGTGTCTGGGCAAAGATTTAGCCTATATTCAGATGAAGTCCATAGCAGCTTCTGTGATGGAATTGTTTGAGATTGATGCGCAACACAAGGACAAGTCCCCTGAACATTTGCACAGTTTCACTTTGAGGATGAAAGGAGGCTTCCCTGTCACCGTAGCCCAAAGAGATCTGGTCAAATCTTGTTAA 1509 0.4738 MQLFSALLFFFLFFLYIYLRFLNSAPKSVKKGFKNYPFIGALPDFVKNRRRFLDWTTQVLRDCPTNTALIVGPGNFLDIFTANPDNVEHILKTKFENYPKGHRMTSIVEDFLGRGIFNADGKLWKVQRKTASYEFNSKSLRNFVMDNVTVEIQTRLLPILSRASETHRVLDLQDILERFAFNNICKLAFNVNPGYLGGDGTTGAEFMRTFDDANILSFGRFMYAFPLLITIKKWLNVGTERKLRKSIAIIHEFADEIIRSRMEAKEAKRDEDLLSRFIGTEDSSPEFLRDIVISFIFAGRDTTSSGLSWFFWIVSSRPDVKQEIRKELESIRSRNGRNIGDAFGYEDLKEMQYLQAAISEAMRLYPPIPLDTRVCLSHDVLPDGTMIKKDWFITYHTYAMGRMESVWGKDWCEFKPERWIENGMYKGENPFRYPVFHAGPRLCLGKDLAYIQMKSIAASVMELFEIDAQHKDKSPEHLHSFTLRMKGGFPVTVAQRDLVKSC 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2203 502 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 436 445 IPR017972 GO:0005506|GO:0016705
Glsi02g2203 502 PRINTS P450 superfamily signature 298 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g2203 502 PRINTS P450 superfamily signature 434 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g2203 502 PRINTS P450 superfamily signature 443 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g2203 502 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g2203 502 SUPERFAMILY Cytochrome P450 32 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g2203 502 CDD CYP86A 79 489 - -
Glsi02g2203 502 PANTHER CYTOCHROME P450 17 491 - -
Glsi02g2203 502 Pfam Cytochrome P450 79 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g2203 502 Gene3D Cytochrome P450 23 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g2203 502 PRINTS E-class P450 group I signature 307 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g2203 502 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g2203 502 PRINTS E-class P450 group I signature 433 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g2203 502 PRINTS E-class P450 group I signature 287 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g2203 502 PRINTS E-class P450 group I signature 443 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2203 Glsi-ChrGlsi02 72632976 72634484 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2203 32 496 Cytochrome P450 AT3G56630 59.915 0.0 592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g2203 02 72632976 72634484 Glsi02g2203 02 72632976 72634484 ECH