Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2201 ATGGAAGCAAAAGGATGTCGTTGTGGGAGTTTTCTTCAGAGGTGTAAGCCTTACATAGCCATGATTTCTCTCCAATTTGGTTACGCTGGGATGAACATAATCACAAAGGTTTCCCTCAACCGTGGGATGAGCCATTATGTGCTTGTCGTTTATAGGCATGCCTTTGCTACCGCAGCTATTGCTCCGTTTGCTCTTGTTCTTGAGAGAAAAGTGAGACCCAAGATTACATTTCTCATGTTCATTCAAATTTTCGTACTGGGTCTTCTTGGGCCTGTCATTGATCAAAACTTGTACTATGCGGGGTTAAAATTTACTTCCCCAACGTACGCATGTGCTATAAGCAACATGCTCCCTGCAATGACGTTCGTGATGGCATTTATTTGCAGAATGGAGAAGGTGGACATTAGAAAAGTTAGATGCATAGCAAAAGTGATTGGAACGGTGGTTACAATTTTTGGGGCCATGTTGATGACACTGTGGAAGGGACGAGTCGTAAACTTTTTCTGGTCTCACTACATGCATCATCCTAGAAACTATGCCCCTGCTAACCCTGCTGATTCCGCGGAAGAAGATTGGGTCAAGGGTTCTATTCTGCTCATAATTGCTACCTTTGCTTGGGCTTCTTTCTTCATCCTTCAGGCAGTGACCTTAAGGAGATACTCTGCCCAGCTCTCTCTCACATCACTAGTGTGTTTTCTGGGTACACTGCAGTCCATTGCAGTTACCTTTGTCATGGAACACAAGGCCTCTGTTTGGACCATTGGCTTGGACATGAATCTATTTGCAGCAGCCTATGCTGGTATAGTGTCATCGGGCATTGCCTACTATGTTCAAGGGATTGTCATGCAGAAAAGAGGGCCTGTTTTCGTCACTGCCTTCAGCCCTTTGATGATGATCATCGTAGCCATCATGGGTTCTTTCATCCTTGCTGAAAACATCTACCTTGGAGGAGTCGTTGGGTCTATACTAATCGTGGTGGGTCTTTACTCGGTTCTATGGGGCAAATACAAGGAGCACAAAGAGAAAGAAGAAGAGACAATCCCAGAAGCGATCAAGGGATGTACAGAAAATGGTAGGGGATGTACAGAAAATGGTAGGATGCCAACTGTGATGGAAGGGATTGAAGAAAACGACATAGAGATGCAAAAGAGTGATGGTAGAAAGGAGTCAACAGCTTCTGCGGTAGCCATTAGTAATCCTAAAGCTTAA 1209 0.445 MEAKGCRCGSFLQRCKPYIAMISLQFGYAGMNIITKVSLNRGMSHYVLVVYRHAFATAAIAPFALVLERKVRPKITFLMFIQIFVLGLLGPVIDQNLYYAGLKFTSPTYACAISNMLPAMTFVMAFICRMEKVDIRKVRCIAKVIGTVVTIFGAMLMTLWKGRVVNFFWSHYMHHPRNYAPANPADSAEEDWVKGSILLIIATFAWASFFILQAVTLRRYSAQLSLTSLVCFLGTLQSIAVTFVMEHKASVWTIGLDMNLFAAAYAGIVSSGIAYYVQGIVMQKRGPVFVTAFSPLMMIIVAIMGSFILAENIYLGGVVGSILIVVGLYSVLWGKYKEHKEKEEETIPEAIKGCTENGRGCTENGRMPTVMEGIEENDIEMQKSDGRKESTASAVAISNPKA 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2201 402 PANTHER WAT1-RELATED PROTEIN 16 343 IPR030184 GO:0016020|GO:0022857
Glsi02g2201 402 MobiDBLite consensus disorder prediction 388 402 - -
Glsi02g2201 402 SUPERFAMILY Multidrug resistance efflux transporter EmrE 239 337 - -
Glsi02g2201 402 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 160 - -
Glsi02g2201 402 MobiDBLite consensus disorder prediction 381 402 - -
Glsi02g2201 402 Pfam EamA-like transporter family 18 157 IPR000620 GO:0016020
Glsi02g2201 402 Pfam EamA-like transporter family 194 332 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2201 Glsi-ChrGlsi02 72613400 72615358 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2201 8 400 Nodulin-like Gene Family AT5G07050 61.461 5.38e-170 479