Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2200 ATGGGATCACATGTAAAGAGCGAAAAATCCAATTTTCACCAACTCCCTCTTTCATATATATCAAGCTGTCTCCAACGCTCCCTCGAAACAGAGACTCCGCTTTTCCCCATTTCTCAATCTCTCTTTCTCCCAATGGCGTTCCTTCTAATACCCATCTCTATTCTCATTCTTTTTCTCTGCTATAAGCTCTATCAGCGCCTGCGGTTCAAGCTCCCACCCGGCCCGCGCCCATGGCCAATCGTCGGCAACCTCTACGACATCAAGCCCGTCAGATTCCGTTGCTTCGCCGAGTGGGCTCAATCCTACGGGCCCATCATATCGGTCTGGTTTGGTTCGACGCTTAACGTCATCGTTTCCAACTCAGAGTTGGCCAGGGAGGTGCTGAAGGAGCATGACCAGCAACTGGCTGACAGGCATAGGAGCCGATCGGCGGCTAAGTTTAGCAGAGACGGGAAGGACCTTATATGGGCCGATTATGGGCCCCACTACGTGAAGGTGAGGAAGGTTTGCACTCTTGAGCTTTTCTCTCCGAAGCGACTCGAGTCCTTGAGACCCATTCGAGAAGATGAGGTCACCGCCATGGTTGAGTCCATTTTCAAGGACTGCATCAATCCTGAAAATGTAGGGAAAAGTATAATGGTGAAGAAGTACTTGGGCGCAGTGGCATTCAACAACATCACAAGGCTAGCATTTGGGAAAAGATTTGTGAACTCAGAAGGCGTGATGGACGAGCAAGGAGTGGAATTCAAGGCCATCGTGGCTAATGGGTTAAAGCTTGGAGCATCTCTAGCCATGGCAGAGCACATTCCTTGGTTGCGCTGGATGTTCCCACTTGAAGAAGAGGCTTTTGCTAAGCATGGGGCTCGTAGGGATAGGCTCACCAGAGCCATCATGGAAGAGCATACTCAAGCACGTAAGACGTCAGGTGGTGCCAAGCAACATTTTGTGGATGCCCTCCTAACGTTGCAAGACCAATATGACCTTAGCGAGGACACTATCATCGGTCTTCTTTGGGATATGATCACAGCTGGGATGGACACTACTGCGATATCAGTGGAGTGGGCCATGGCTGAGCTGATAAGAAATCCAAGGGTACAACAAAAGGCCCAAGAAGAGCTAGATCGAGTTATTGGGTTTGAAAGGGTCATGACTGAATCCGACTTCTCAAACCTCCCTTACCTCCAATGTGTAGCCAAGGAGGCTATGCGGCTACACCCTCCAACCCCACTCATGCTCCCACACAGGGCCAATGCCAATGTCAAAGTTGGTGGCTACGATATTCCCAAAGGGTCCAATGTACATGTTAACGTTTGGGCCGTAGCTCGTGACCCAGCTGTTTGGAAAAATCCGTTGGAGTACCGACCCGAGAGGTTCCTTGAAGAGGATGTGGACATGAAGGGCCATGACTTTAGGCTATTGCCTTTTGGAGCAGGTCGACGAGTATGTCCAGGTGCACAACTTGGCATTAATCTAGTGACATCTATGTTGGGTCACCTCCTACACCATTTTAGTTGGGCACCACCGGAAGGAGTAAAGCCTGAGGAGATTGACATGGCAGAGAACCCTGGATTGGTGACCTACATGCGAACCCCGCTACAGGCTGTAACCACTGCTAGGCTACCCTCTCACTTGTATAAACGTGTGCCTGCCGATATATAA 1659 0.5021 MGSHVKSEKSNFHQLPLSYISSCLQRSLETETPLFPISQSLFLPMAFLLIPISILILFLCYKLYQRLRFKLPPGPRPWPIVGNLYDIKPVRFRCFAEWAQSYGPIISVWFGSTLNVIVSNSELAREVLKEHDQQLADRHRSRSAAKFSRDGKDLIWADYGPHYVKVRKVCTLELFSPKRLESLRPIREDEVTAMVESIFKDCINPENVGKSIMVKKYLGAVAFNNITRLAFGKRFVNSEGVMDEQGVEFKAIVANGLKLGASLAMAEHIPWLRWMFPLEEEAFAKHGARRDRLTRAIMEEHTQARKTSGGAKQHFVDALLTLQDQYDLSEDTIIGLLWDMITAGMDTTAISVEWAMAELIRNPRVQQKAQEELDRVIGFERVMTESDFSNLPYLQCVAKEAMRLHPPTPLMLPHRANANVKVGGYDIPKGSNVHVNVWAVARDPAVWKNPLEYRPERFLEEDVDMKGHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFSWAPPEGVKPEEIDMAENPGLVTYMRTPLQAVTTARLPSHLYKRVPADI 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2200 552 PANTHER CYTOCHROME P450 98A9 46 546 - -
Glsi02g2200 552 SUPERFAMILY Cytochrome P450 72 539 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g2200 552 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 475 484 IPR017972 GO:0005506|GO:0016705
Glsi02g2200 552 PRINTS P450 superfamily signature 473 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g2200 552 PRINTS P450 superfamily signature 396 407 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g2200 552 PRINTS P450 superfamily signature 343 360 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g2200 552 Pfam Cytochrome P450 72 524 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g2200 552 CDD CYP98 102 534 - -
Glsi02g2200 552 Gene3D Cytochrome P450 65 544 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g2200 552 PRINTS E-class P450 group I signature 472 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g2200 552 PRINTS E-class P450 group I signature 482 505 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g2200 552 PRINTS E-class P450 group I signature 99 118 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g2200 552 PRINTS E-class P450 group I signature 395 413 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g2200 552 PRINTS E-class P450 group I signature 436 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g2200 552 PRINTS E-class P450 group I signature 123 144 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g2200 552 PRINTS E-class P450 group I signature 221 239 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g2200 552 PRINTS E-class P450 group I signature 332 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g2200 552 PRINTS E-class P450 group I signature 352 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g2200 552 FunFam Cytochrome P450 65 543 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2200 Glsi-ChrGlsi02 72601601 72605680 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2200 45 552 Monolignol Biosynthesis Gene Families AT2G40890 81.299 0.0 897