Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2199 ATGGCATTCCTTCTAATACCCATCTCTATTCTCACCCTTTTTCTCTGTTATAAGCTCTATCAGCGCCTACGGTTCAAGCTCCCACCCGGCCCACGCCCATGGCCAATCGTCGGCAACCTCTACGACATCAAGCCCGTCAGATGTCGTTGCTTCGCCGAGTGGGCTCAATCCTACGGACCCATAATGTCGGTCTGGATTGGTTCGACGCTCAACGTCATCGTTTCCAACTCAGAGTTGGCCAGGGAGGTGCTGAAGGACCATGACCAGCACCTGGCTGACAGGCATAGGAGCCGATCATCTGCTAGGTTTAGCAGAGATGGGAAGGACCTTATATGGGCCGATTATGGGCCCCACTACGTGAAGGTGAGGAAGGTTTGCAACCTTGAGCTTTTCTCGGCGAAGCGACTCGAGGACTTGAGACCCCTTCGAGAAGATGAGGTCACCGCCATGGTTGAGTCCATTTTCAAGGACTGCATCAATCCTGAAAACGTAGGGAAAAGTATATTGGTGAAGAATTACCTGGGGGCAGTGGCATTTAACCACATCACAAGGCTGGCATTTGGGAAAAGATTTGTAAACTCAGAAGACGTGATGGACAAGCAAGGAGTTGAATTCAAGGCCATCGGGGAGAATGGGTTAAAGCTTGGAGCATCTCTAGCCATGGCAGAGCACATTCCTTGGTTGCGCTGGATGTTCCCACTTGAAGAAGAGGCTTTTGCTAAGCATGGGGCTCGCAGGGATAGACTCACCAGAGTCATCATGGAAGAGCACACTCAAGCACGTAAGACGTCAGGTGGTGCCAAGCAACATTTTGTGGATGCCCTCCTCACGTTGCAAGCCAAATATGACCTTAGCGAGGACACTATCATTGGTCTTCTTTGGGATATGATCACAGCTGGGATGGACACTATTGCAATATCGGTGGAGTGGGCTATGGCTGAGCTGATAAGAAACCCAAGGGTACAGCAGAAGGCCCAACAAGAGCTAGATCGAGTTATTGGGTTTGAGCGGGTCATGACAGAATCCGACTTCTCAAACCTCCCTTACCTCCAATGTGTAGCCAAGGAGGCTTTGCGGCTACACCCTCCAACCCCACTCATGCTACCACACAAGGCCCACGTCAATGTCAAAGTTGGCGGCTATGATATTCCCAAGGGGACCACAGTACAAGTAAACGTTTGGGCCATAGCTCGTGATCCAACTGTTTGGAAGGATCCATTGGAGTTCCGACCCGAGAGGTTTCTTGAGGATGATATAGACATAAAGGGTCACAACTTTAAGGTATTGCCATTTGGAGCAGGTAGACGGGTATGCCCAGGTGCACAACTTGGAATCAATCTAGTGACATCCATGTTGGGTCACCTACTACACCATTTTAGTTGGGCTCCACCAGAAGGAGTGAAGCCCAATGAGATCGACATATTAGAGAAACCTGGATTGGTCACCTACATGCGGACCCCACTACAGGCTGTGGCTACTCCTAGACTGTCCTCTCACTTGTTCAAACGTGTGCCTGCAGATATATAA 1527 0.5016 MAFLLIPISILTLFLCYKLYQRLRFKLPPGPRPWPIVGNLYDIKPVRCRCFAEWAQSYGPIMSVWIGSTLNVIVSNSELAREVLKDHDQHLADRHRSRSSARFSRDGKDLIWADYGPHYVKVRKVCNLELFSAKRLEDLRPLREDEVTAMVESIFKDCINPENVGKSILVKNYLGAVAFNHITRLAFGKRFVNSEDVMDKQGVEFKAIGENGLKLGASLAMAEHIPWLRWMFPLEEEAFAKHGARRDRLTRVIMEEHTQARKTSGGAKQHFVDALLTLQAKYDLSEDTIIGLLWDMITAGMDTIAISVEWAMAELIRNPRVQQKAQQELDRVIGFERVMTESDFSNLPYLQCVAKEALRLHPPTPLMLPHKAHVNVKVGGYDIPKGTTVQVNVWAIARDPTVWKDPLEFRPERFLEDDIDIKGHNFKVLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFSWAPPEGVKPNEIDILEKPGLVTYMRTPLQAVATPRLSSHLFKRVPADI 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2199 508 PANTHER CYTOCHROME P450 98A9 11 502 - -
Glsi02g2199 508 PRINTS P450 superfamily signature 299 316 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g2199 508 PRINTS P450 superfamily signature 352 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g2199 508 PRINTS P450 superfamily signature 429 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g2199 508 FunFam Cytochrome P450 21 499 - -
Glsi02g2199 508 PRINTS E-class P450 group I signature 177 195 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g2199 508 PRINTS E-class P450 group I signature 79 100 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g2199 508 PRINTS E-class P450 group I signature 428 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g2199 508 PRINTS E-class P450 group I signature 351 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g2199 508 PRINTS E-class P450 group I signature 392 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g2199 508 PRINTS E-class P450 group I signature 438 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g2199 508 PRINTS E-class P450 group I signature 308 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g2199 508 PRINTS E-class P450 group I signature 55 74 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g2199 508 PRINTS E-class P450 group I signature 288 305 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g2199 508 Pfam Cytochrome P450 28 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g2199 508 SUPERFAMILY Cytochrome P450 28 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g2199 508 Gene3D Cytochrome P450 21 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g2199 508 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 431 440 IPR017972 GO:0005506|GO:0016705
Glsi02g2199 508 CDD CYP98 58 490 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2199 Glsi-ChrGlsi02 72588519 72591711 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2199 1 508 Monolignol Biosynthesis Gene Families AT2G40890 74.803 0.0 833