Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2181 ATGGCAGACTTGTGCCCTTTCAGCGAGTTCAGTTGTGGTGCTGTTGAGGACAAATACAGTTTATCCAAAAATGTTTCCTGGAACACACAGGCACTGAAAGAAGTGAAAGATGTTCAGATTTCTGGAGCAGAAGATTGGGGAGACTCAGGGGGAATTGATTCTTTTTGCTCTAATTTTGGCTTATTCCCAGATCATGATTCATCATCAGAAGGGTACCTTTTATCCTCTACTCACCAAAAGGATCAGCATGACCTATCATATATGGATTATGGACTATTAGATAATCTGCAGTTTGACATGGTCTCTTCACGTCTCCAAACACGTCAGATTGATGAACTTCCAACTATGGTTGAACTTGGGGAACCCACCAAGCAAAAGCACCAGTTTTCTTTCCCTTTAGCCTCACTTGAGCTTCTGAACAACTATGGCAATGGATTCAAAAGGTTATATGGTGAAACTGAAAGAATTGTTCAGCCAATCATTGATGATTTGACATTAACAAATGCACCTGAGAGGAAGCTGTCAGCTGAAGATGTGATGAGGACAGCTGGAACAAGGTTCATTCACTCATCATCATCATCATCATCTGCAGAATCAGCTGGTTTTCAGTACTTGATAAGTCACCCTTTTGATTTTTCTTTCTCTGGACTCTCTGATGAAGAGAGAAAGGATGTGGAACTTGCAGAAGCCCTTCTAGCCTCTGCTGAACAAGTGGGGTATCAGCAGTTTGAACGTGCTGGAAAACTGCTTAATCACTGTGAATCAATGTCTGCCAATACTGGGAATTCGGTTCAGCGCCTTGTTTATTATTTCGCCGAAGCTCTTCGTGAGAGGATAGATAGAGAAACAGGAAGAGTTTCATCAAAGGTTACTGACAAAGAAAAGCCATGGTTTGATCCTGATAAAGCTATGCTGAGTCCAAGCCCTACTGCCATTGCATGCCATGCAGATCTGCCTTTCTCTCAGGTTGTAGAGTTCACGGGAGTTCAAGCCATCATAGAAAATGTAACTGAGGCTAGGAAGATTCACATTATCGATCTGGGAATCAGAAAGGGAACACAATGGGCGATTCTGATGCAAGCCCTTGAATCTAGACGAGAATGTCCACTTGAGCTTCTGAAAATAACAGCAGTAGGAACCACAATGAAGCATTTGATTGAGGCCACAGGGAAGAGGCTGATGAACTTCGCTCAGTCCATGAACATACCCTGCTCTTTCAAGATAGTTACGGTATCTGACATGAAGCATCTCAAGGAAGATCTCTTTGAGCTAGACCCTGAGGAAACAATAGCAGTTTACTCCAAGTTTGCATTGAGGTGCATGATTTCACAACCAGATCAGCTTGAATCTGTGATGAGAGTGATCAGAAACATCAACCCAATTGTAATGGTGGTGACTGAAGTTGAGGCAAACCACAACTCCACATCTTTTGTGGACCGCTTTACTGAAACTCTCTTCTACTGCAGTGCATTCTTTGATTGCCTTGAGACTTACATGAAAAGGGATGACCCCAACAGAATGGTTGTGGAATCACTGTACTTCAGCCATGGAATCAGGAATATTTTGGCAGCAGAAGGAGCAGAAAGGAAGATTCGGAATGTTAAGATCGATGTTTGGAGGGCTTTTTTCACCCGGTTTGGGATGGTGGAGGAAGAACTGAGCATGTCATCGTTATACCAAGCGGATCTGGTTGCCAAGAGATTTGCTTGTGGGAGTTTTTGCACATTTGAAATGAATGGGAGTTGCCTACTAACTGGGTGGAAAGGAACCCCACTTCATTCTCTTTCTGTATGGAAATTCCTTTGA 1806 0.4297 MADLCPFSEFSCGAVEDKYSLSKNVSWNTQALKEVKDVQISGAEDWGDSGGIDSFCSNFGLFPDHDSSSEGYLLSSTHQKDQHDLSYMDYGLLDNLQFDMVSSRLQTRQIDELPTMVELGEPTKQKHQFSFPLASLELLNNYGNGFKRLYGETERIVQPIIDDLTLTNAPERKLSAEDVMRTAGTRFIHSSSSSSSAESAGFQYLISHPFDFSFSGLSDEERKDVELAEALLASAEQVGYQQFERAGKLLNHCESMSANTGNSVQRLVYYFAEALRERIDRETGRVSSKVTDKEKPWFDPDKAMLSPSPTAIACHADLPFSQVVEFTGVQAIIENVTEARKIHIIDLGIRKGTQWAILMQALESRRECPLELLKITAVGTTMKHLIEATGKRLMNFAQSMNIPCSFKIVTVSDMKHLKEDLFELDPEETIAVYSKFALRCMISQPDQLESVMRVIRNINPIVMVVTEVEANHNSTSFVDRFTETLFYCSAFFDCLETYMKRDDPNRMVVESLYFSHGIRNILAAEGAERKIRNVKIDVWRAFFTRFGMVEEELSMSSLYQADLVAKRFACGSFCTFEMNGSCLLTGWKGTPLHSLSVWKFL 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2181 601 Pfam GRAS domain family 228 599 IPR005202 -
Glsi02g2181 601 ProSiteProfiles GRAS family profile. 218 599 IPR005202 -
Glsi02g2181 601 Coils Coil 218 238 - -
Glsi02g2181 601 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 189 592 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2181 Glsi-ChrGlsi02 72324691 72326496 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2181 217 600 GRAS Transcription Factor Family AT3G03450 31.959 2.40e-58 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Glsi02g2181 GRAS 3e-86 CL0063