Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2173 ATGGTTGACAGCAAAGAGAGCAAGGTTCTTATAAGGGAATTTGATGAAGACAGAGATGTTAAAGTGGTGGGGAAGCTTGAGAGGAACTGTGAGATTGGGACTAAAAAGGGGGTCTCTATTTTCACCAACATGATGGGTGACCCTTTATCTAGGATTAGGTTCTACCCCCTTCATGTTATGTTGGTAGCTGAGCAGCTTGAAAATGGTGAGCTTGTTGGTGTGGTTCGGGGATGCATTAAGACTGTGGGGACTCATTCTGGATCACTCTTGAAGATGGGTTGCATACTAGGCCTTCGAGTCTCTCCCAATTATCGGAGAAAGGGGGTTGGACTGAGACTTGTTAGCTCAGTCGAAGAATGGATGCTGAGAAATGGAGCTGAGTATTCATTCGCAGCCACTGAAAAGAATAACGATGCCTCCACAAACCTATTCACCATCAAATGCAACTACGTGAACCTCAGCTCTCTGGTCATTTTCATCCATCCCACTAGTTTTAGTTTCCCTGAGAAGCACATGACCAGAGAGATAAGAATAGAGAAGTTGAGCATAGACCAGGCCATTTCTTTGTATGGAAAAACCTTGAAGGATAAAGAGTTATATTTAACAGACATGGACATTATTCTGAAAGAGAAGCTCAGCTTAGGCACATGGGTAAGCTATTACAAAGATGAGGGTTGGATCAATGAAACTACGACTCCTTCAAGATCTTGGATCATCTTTAGCATATGGAACACCTGCAAAGCTTATAAGCTTCAGATTAGGAAGTCTCAACCTCTTAGGTTTCTTCTTCACAGTACTCTGAATCATGCAAGAGAGAAGATTTTCCCTTGTCTGAGAATGCCAGTGAGTGACTCTCTCTCGAGACCCTTTGGGTTTCTCTTCATCTATGGATTCCATGGAGAAGGAGAGAACCTTGGGGAGCTCATGGAATCTGTGTGGAGGTTTACATCAAGGTTGGGAGAAAGCATGAAGGATTGCCAAGTGGTTATAACCGAGTTAGGGTACGCTGATCCTCTTGCAAAGCATGTTCCTCGAACAGCCTCTATGTCATGTATCGATGATCTGTGGTACACAAAAAGGCTTTCAGGCCACAGTGATGAAAAGGATGAAGTGCTTATGAAGGGACAATTGAGGAATGTGTTTGTTGATCCTAGAGATTTTTAG 1164 0.433 MVDSKESKVLIREFDEDRDVKVVGKLERNCEIGTKKGVSIFTNMMGDPLSRIRFYPLHVMLVAEQLENGELVGVVRGCIKTVGTHSGSLLKMGCILGLRVSPNYRRKGVGLRLVSSVEEWMLRNGAEYSFAATEKNNDASTNLFTIKCNYVNLSSLVIFIHPTSFSFPEKHMTREIRIEKLSIDQAISLYGKTLKDKELYLTDMDIILKEKLSLGTWVSYYKDEGWINETTTPSRSWIIFSIWNTCKAYKLQIRKSQPLRFLLHSTLNHAREKIFPCLRMPVSDSLSRPFGFLFIYGFHGEGENLGELMESVWRFTSRLGESMKDCQVVITELGYADPLAKHVPRTASMSCIDDLWYTKRLSGHSDEKDEVLMKGQLRNVFVDPRDF 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2173 387 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 8 144 IPR016181 -
Glsi02g2173 387 Gene3D - 20 161 - -
Glsi02g2173 387 CDD NAT_SF 60 128 - -
Glsi02g2173 387 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 9 213 IPR000182 GO:0016747
Glsi02g2173 387 Pfam Acetyltransferase (GNAT) family 65 149 IPR000182 GO:0016747
Glsi02g2173 387 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 5 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2173 Glsi-ChrGlsi02 72229289 72230805 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Glsi02g2173 Acetyltransf_1 7.4e-14 CL0257
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g2173 02 72229289 72230805 Glsi02g2173 02 72229289 72230805 ECH