Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2167 ATGACTTCCATTACCTCTACCCTGTTTTCTCTTGTTTTTGTATCTTTCACCATAATTGCTAGTGGAAAACCTGCACCAGATTTTGGTAATAATTCCTACATCATTTCTTGTGGTTCTTCCAATGCTGAAACCGATTCTAATGGGCAAAAGTGGGTGTCAGATTCTAAGTTTCTAACCTCTTCCACTAATACAATAAATTCAACAGCACAATACCAAGACCCTTCTCTACCTTCCCAGATCCCTTACATGTCTGCAAGAATCTTCACTTCTCCATCCACATACAAATTTCAAGTTCCCCCCAAGAGTCGCCTCTGGGTTCGTCTCCATTTTTATCCGTCTTCTTACAGCACCCTTAGTCCCTTGGATTCCTATTTCTCTGTTGCAACAAATGATCTTACTCTCCTCAACAATTTCAGTGCCTCCATTACAGCACAAGCTCTCACACAGGCCTTTTTCATCAAAGAGTTTTCTCTCGTGCCAGTCCAATATGGAGAATTGAACCTCACCTTCACACCCTCCTCGCAGCACAAGGGATCATATGCTTTCATCAACGGCATTGAGATCATCCCTATGCCGGACATATTCCAGCCTGCAATAATGGTTTCCACAGTTGATTCTTTTGATGTTGGGAGCAACTCGTTGCAGACAATGTTTCGGTTGAACGTTGGAGGACAGTACATTGCACCCAACGATGATTCTGGTCTTAGCAGGACATGGTACGATGACTCCCCCTATTTGTTTGGTGCAGCAGGTGGGGTCACTTTTAAAGCTGATGAGGATGTGAAAATCCAATACCCTTCCGATATGCCCCAGTTCATTGCCCCTTTGGATGTTTATAGCACTGCAAGATCGATGGGTCCAAATGCCACGGTCAATCAGAACTATAACCTTACCTGGGTGTTTTGGGTTGATGCAAATTTTACCTACGTTGTCAGGTTCCATTTCTGTGAATTGGTCCAAACTAAAATCAACCAAAGGGTGTTTGACATTTACGTTAATAATCAAACTGCACAAGAAACTGCTGATGTTATTGCATGGGCAGGATCCAAAGGGGTTCCGACTTATAAAGACTTTGCAATTTACGTCCCGGACAGACCTGGGGATGAAGAACTGTGGGTGGCATTGCACCCTTCAGTGTCAATGAAACCAGAATACTATGATGCAATTCTTAATGGATTGGAGGTGTTTAAGATCAATGATACCAATGGGAACTTAGCAGGGCCTAATCCTACCCCATCTCAGATGCTTATTGATGCTCAAACTCAGGAAGATAAGAATTTTAGCTCATCAAAATCTGATAATGGTCCAATCATAGGAGGCGTAGCTGGAGGGACTGTCGGGGTTGCTTTTGTTGTAGCTGTCTGCTTTGTTGTTTACAGAAAGAGAAAAGATTATGGGAAAGATTCAGTTGTTGGAAACTGGTTGCCTCTTTATGGGAATTCTCAAGCATCAACAAGCAAACCAACAATTTCTGGTAAGAGTATAGGTAGCAGTCATCTTTCAACTCTGCAGCAAGGCTTGTGCCGACATTTTTCCTTACCTGAGATCAGACATGCGACCAAGAACTTCAACGAATCGCAGGTCATTGGTGTTGGTGGGTTTGGGAAAGTCTATAAAGGTGTCATAGATGGCGGGACCAAAGTGGCCATAAAAAGATCAAACCCATCTTCAGAGCAAGGAGTTTTGGAGTTCCAGACTGAAATCGACATGCTTTCAAAGCTAAGGCACAAACACTTGGTCTCTCTAATTGGGTTTTGTGAAGAAGATGGTGAAATGATTCTGGTTTATGATTACATGGCTAATGGAACTCTCAGAGAGCACCTTTACAGGAGCAACAAGCCTGCTTTACCGTGGAAGCAGAGGCTAGAAATCTGCATTGGAGCTGCAAGAGGGCTTCACTACCTTCATACAGGGGCAAAATATACCATCATTCACAGGGATGTTAAAACTACAAACATACTATTAGATGAAAACTGGGTAGCAAAAGTTTCTGATTTTGGGTTATCAAAAACTGGTCCTAATATGAACCAAACCCATGTTAGCACAGTGGTGAAAGGTAGCTTTGGCTACTTGGATCCTGAGTACTTTCGCAGGCAACAACTCACAGAGAAATCTGATGTTTATTCTTTTGGGGTGGTTCTGTTTGAAGTTTTATGTGCAAGGCCAGCACTTGATCCTAGCTTGCCAAAAGAGCAAGTTAGCCTAGCAGATTGGGCTTCATTGTGCCAAAGGAAGAAGGGGAATATTGAGGGTATTATTGATCCTCTTCTCAAAGGTAAGATCAACCCTGAGTGCTTGAAGAAATTTGCAGAGACAGCTCTGAAATGTTTAGCTGATCATGGCCTTGAACGACCTCCAATGGCGGATGTGTTGTGGAACCTTGAGTTTGCACTTCAATTGCAGGAGAATCCTAGTGGAGGAGAACATGCAGCAGAAGAGAAGGCAAATGATGCTTATGCTATGCACAATAATGCCATGTTGAACAATGAAGAGGGAAGTATAAGCAGTGAGCTTGACGACCCAAGTTCAAGTGAAGTTTTTTCGCAAATTGTTGACCAAAGAGGAAGATAA 2571 0.4278 MTSITSTLFSLVFVSFTIIASGKPAPDFGNNSYIISCGSSNAETDSNGQKWVSDSKFLTSSTNTINSTAQYQDPSLPSQIPYMSARIFTSPSTYKFQVPPKSRLWVRLHFYPSSYSTLSPLDSYFSVATNDLTLLNNFSASITAQALTQAFFIKEFSLVPVQYGELNLTFTPSSQHKGSYAFINGIEIIPMPDIFQPAIMVSTVDSFDVGSNSLQTMFRLNVGGQYIAPNDDSGLSRTWYDDSPYLFGAAGGVTFKADEDVKIQYPSDMPQFIAPLDVYSTARSMGPNATVNQNYNLTWVFWVDANFTYVVRFHFCELVQTKINQRVFDIYVNNQTAQETADVIAWAGSKGVPTYKDFAIYVPDRPGDEELWVALHPSVSMKPEYYDAILNGLEVFKINDTNGNLAGPNPTPSQMLIDAQTQEDKNFSSSKSDNGPIIGGVAGGTVGVAFVVAVCFVVYRKRKDYGKDSVVGNWLPLYGNSQASTSKPTISGKSIGSSHLSTLQQGLCRHFSLPEIRHATKNFNESQVIGVGGFGKVYKGVIDGGTKVAIKRSNPSSEQGVLEFQTEIDMLSKLRHKHLVSLIGFCEEDGEMILVYDYMANGTLREHLYRSNKPALPWKQRLEICIGAARGLHYLHTGAKYTIIHRDVKTTNILLDENWVAKVSDFGLSKTGPNMNQTHVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPALDPSLPKEQVSLADWASLCQRKKGNIEGIIDPLLKGKINPECLKKFAETALKCLADHGLERPPMADVLWNLEFALQLQENPSGGEHAAEEKANDAYAMHNNAMLNNEEGSISSELDDPSSSEVFSQIVDQRGR 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2167 856 Gene3D Transferase(Phosphotransferase) domain 1 599 821 - -
Glsi02g2167 856 Gene3D Single helix bin 423 463 - -
Glsi02g2167 856 ProSitePatterns Protein kinases ATP-binding region signature. 529 551 IPR017441 GO:0005524
Glsi02g2167 856 MobiDBLite consensus disorder prediction 827 856 - -
Glsi02g2167 856 Gene3D - 30 191 - -
Glsi02g2167 856 Gene3D - 213 399 - -
Glsi02g2167 856 Pfam Malectin-like domain 35 398 IPR024788 -
Glsi02g2167 856 Gene3D Phosphorylase Kinase; domain 1 485 598 - -
Glsi02g2167 856 CDD STKc_IRAK 529 795 - -
Glsi02g2167 856 ProSiteProfiles Protein kinase domain profile. 523 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g2167 856 Pfam Protein tyrosine and serine/threonine kinase 526 790 IPR001245 GO:0004672|GO:0006468
Glsi02g2167 856 FunFam FERONIA receptor-like kinase 32 192 - -
Glsi02g2167 856 FunFam receptor-like protein kinase FERONIA 486 598 - -
Glsi02g2167 856 FunFam FERONIA receptor-like kinase 212 399 - -
Glsi02g2167 856 ProSitePatterns Serine/Threonine protein kinases active-site signature. 643 655 IPR008271 GO:0004672|GO:0006468
Glsi02g2167 856 FunFam Receptor-like protein kinase FERONIA 599 816 - -
Glsi02g2167 856 PANTHER OS03G0124300 PROTEIN-RELATED 6 467 IPR046957 GO:0004672
Glsi02g2167 856 MobiDBLite consensus disorder prediction 827 850 - -
Glsi02g2167 856 SMART serkin_6 523 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g2167 856 SUPERFAMILY Protein kinase-like (PK-like) 498 797 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2167 Glsi-ChrGlsi02 72152324 72154894 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2167 17 856 Receptor kinase-like Gene Family AT3G51550 56.257 0.0 934
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Glsi02g2167 Malectin_like 5.1e-44 CL0202