Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2164 ATGGGAACCCCACCAACAGAAGAACTTCTAAAAAAGATCGAGGACCTCGAGGCGGGTCAGGCCCACCTCCGTCAAGAAATATCCAAGCTTAAGCTCTCGGGCGGGGGCGATGCCAGAGCCGAGCAGGGTCATCATCGCCAGAGGTCTCACTCGATATCACCGCAGCGTTCGAGATTGGGTGCGCCAAGGAGGAGAGCCGGAGGTGGGGGATTAGACGGACCAGCTGCGTGGAAAAAAAGGTGGTCTTCGTTTAAACATTCATCCCCGCTTCAGAGGGAAAGCCGCAGTTGTGATCCTCCAGATGGTGGAGAAGGAGAAGGCGGCGTACACAGGGGCTCTTCAGCTGTGAATTTAACTGATAGGCAGTATCGGAATATTTTGCAGTCAATGGGACAGTCCGTTCATATATTGGATATTAACGGTCGTATAATATACTGGAACCGTAGTGCTGAAAATTTATATGGTTATTCAGCGGAGGAAGCCCTTGGTCAGGATGGCATTGAGCTGCTAGTAGACGCCAGGGATTTTGCTCCAGCCAATGATATAGTCAACCGGGTCACAATGGGAGAGAGCTGGACTGGGCAGTTCCCTGCCAAAAATAAGATGGGAGAGAAGATTTTATCTGTGGTAACCAATACTCCTTTCTACGATGATGATGGAAGTTTGATTGGGATGATTTGTGTATCAAGTGATTCACGACCCTTTCTTGAAATGAGAATTCGATTTTCAGATGTAAAGTACGTTGAACCAGATTCAGGCGCCAGCCATCCTAAAAGTAGCATTGCAACTAAACTTGATCTTGACTCGCAACAGCCACTTCAAGCATCCAAGGTGAGTAACAAAATTAAGCCAAGAATCCGAACAGGAGAAAATGACGTGGATCGTGAAGGTGGGAGCGGAGAAAGTCATCATTCTGAGCATAGTTTCTCAGATTCTGTTCTTTATGACCAGAGAGAGGATGCTAATTCTAGTGGAGCTAGCACACCCAGAGGAGATGTGTCGGCATCTCCTTTTGGTGTATTTTTTCATGTTGAAGAAAAATACCAAGGAAAAAATTTAAGAGACGCTGGTGATGAAAATGAAGGAAAACCTATCCATAAAATCTTAACTTCCAAGGCTGAAGCATGGGTTCAAAAGAAAACAATATCATGGCCATGGAAAGCAAATGGACAAGACTGGTCAGAGGCAAGGAATGTCCGTGTTGCTTGGCCTTGGTTGCAGAATGATCAAGAAAATGAACCGGTTAATCGGAATATTCCTTCTTCTGGGGTGAGGCCTGAAAGCCAGGCAGGTGAAAGTAATCGACCTGTTAATAATGAGGCCTCAGGATCCTGGTCCTCCTCCTTCAACCTTAACAGCACAGGTAGTGCCGGCAGCTATGGGTGTGGCAGCAGCTGTGCTGTCATTAATAAATTGGACATGGATACTGATTGCTTGGATTATGAAATCTTGTGGGAGGACTTGACAATTGGAGAACAAATTGGGCAAGGTTCATGTGGAACCGTATATCATGCTCTGTGGTACGGATCAGATGTTGCTGTCAAGGTATTCTCCAAGAAAGAGTACTCAGATGATGTAATGATGTTCTTCAGACAAGAGGTGTCTGTTATGAAAAGACTTCGACATCCAAATGTTCTTCTTTTTATGGGGGCAGTGGCTTCACCTCAACGTCTCTGTATTGTGACAGAGTTCCTCCCACGTGGAAGCTTGTTTTGCTTGCTCCAGAGAAACACATCCAAATTTGACTGGAGACGGCGAGTTAATATGGCCTTAGATATTGCACGAGGAGTAAACTATCTTCATCATTGCAACCCACCTATCATTCATCAAGATTTGAAGTCTTCAAATCTTTTAGTTGATAGGAACTGGACTGTTAAGGTTGGTGATTTTGGTCTTTCATGTCTTAAGCACGAAACATATCTCACAACCAAGACAGGACAGGGCACGCCTCAATGGATGGCACCAGAAGTGCTTCGTAATGAGCCCTCAAATGAGAAGTCCGATGTATACAGCTTTGGGGTGATATTGTGGGAACTTACAACTGAAAAGATCCCTTGGGAGAGTCTCAACTCAATGCAGGTGATTGGAGCTGTAGGGTTCATGAATCAGAGGCTAGAAATTCCAAAAGATGTTGATCCAAAGTGGACTGCTATAATTGAGAGCTGCTGGCATAGTGATCCGGCTTGCAGGCCGACATTCCAGGAACTGCTGGAAAAGCTTAGAGAGCTGCAGAGACAGTATGCCCTTCAGTTTCAACCAGCCCGATCTGCCGGTGGGGAAAACACCCAAAAGGAGTCATAG 2301 0.4576 MGTPPTEELLKKIEDLEAGQAHLRQEISKLKLSGGGDARAEQGHHRQRSHSISPQRSRLGAPRRRAGGGGLDGPAAWKKRWSSFKHSSPLQRESRSCDPPDGGEGEGGVHRGSSAVNLTDRQYRNILQSMGQSVHILDINGRIIYWNRSAENLYGYSAEEALGQDGIELLVDARDFAPANDIVNRVTMGESWTGQFPAKNKMGEKILSVVTNTPFYDDDGSLIGMICVSSDSRPFLEMRIRFSDVKYVEPDSGASHPKSSIATKLDLDSQQPLQASKVSNKIKPRIRTGENDVDREGGSGESHHSEHSFSDSVLYDQREDANSSGASTPRGDVSASPFGVFFHVEEKYQGKNLRDAGDENEGKPIHKILTSKAEAWVQKKTISWPWKANGQDWSEARNVRVAWPWLQNDQENEPVNRNIPSSGVRPESQAGESNRPVNNEASGSWSSSFNLNSTGSAGSYGCGSSCAVINKLDMDTDCLDYEILWEDLTIGEQIGQGSCGTVYHALWYGSDVAVKVFSKKEYSDDVMMFFRQEVSVMKRLRHPNVLLFMGAVASPQRLCIVTEFLPRGSLFCLLQRNTSKFDWRRRVNMALDIARGVNYLHHCNPPIIHQDLKSSNLLVDRNWTVKVGDFGLSCLKHETYLTTKTGQGTPQWMAPEVLRNEPSNEKSDVYSFGVILWELTTEKIPWESLNSMQVIGAVGFMNQRLEIPKDVDPKWTAIIESCWHSDPACRPTFQELLEKLRELQRQYALQFQPARSAGGENTQKES 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2164 766 ProSiteProfiles PAS repeat profile. 119 190 IPR000014 -
Glsi02g2164 766 MobiDBLite consensus disorder prediction 249 310 - -
Glsi02g2164 766 Gene3D Phosphorylase Kinase; domain 1 481 565 - -
Glsi02g2164 766 SUPERFAMILY PYP-like sensor domain (PAS domain) 120 231 IPR035965 -
Glsi02g2164 766 Gene3D PAS domain 131 234 - -
Glsi02g2164 766 Pfam Protein tyrosine and serine/threonine kinase 488 740 IPR001245 GO:0004672|GO:0006468
Glsi02g2164 766 MobiDBLite consensus disorder prediction 283 310 - -
Glsi02g2164 766 CDD STKc_MAP3K-like 494 740 - -
Glsi02g2164 766 Pfam PAS fold 122 228 IPR013767 GO:0006355
Glsi02g2164 766 SUPERFAMILY Protein kinase-like (PK-like) 477 739 IPR011009 -
Glsi02g2164 766 CDD PAS 130 231 IPR000014 -
Glsi02g2164 766 NCBIfam PAS domain S-box protein 121 230 IPR000014 -
Glsi02g2164 766 MobiDBLite consensus disorder prediction 27 115 - -
Glsi02g2164 766 ProSitePatterns Serine/Threonine protein kinases active-site signature. 607 619 IPR008271 GO:0004672|GO:0006468
Glsi02g2164 766 MobiDBLite consensus disorder prediction 411 444 - -
Glsi02g2164 766 Coils Coil 6 33 - -
Glsi02g2164 766 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 185 745 - -
Glsi02g2164 766 SMART pas_2 121 188 IPR000014 -
Glsi02g2164 766 FunFam PAS domain-containing protein tyrosine kinase family protein 566 757 - -
Glsi02g2164 766 FunFam PAS domain-containing protein tyrosine kinase 481 565 - -
Glsi02g2164 766 SMART serkin_6 488 748 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g2164 766 PRINTS Tyrosine kinase catalytic domain signature 562 575 IPR001245 GO:0004672|GO:0006468
Glsi02g2164 766 PRINTS Tyrosine kinase catalytic domain signature 648 658 IPR001245 GO:0004672|GO:0006468
Glsi02g2164 766 PRINTS Tyrosine kinase catalytic domain signature 711 733 IPR001245 GO:0004672|GO:0006468
Glsi02g2164 766 PRINTS Tyrosine kinase catalytic domain signature 667 689 IPR001245 GO:0004672|GO:0006468
Glsi02g2164 766 PRINTS Tyrosine kinase catalytic domain signature 601 619 IPR001245 GO:0004672|GO:0006468
Glsi02g2164 766 Gene3D Transferase(Phosphotransferase) domain 1 567 752 - -
Glsi02g2164 766 ProSiteProfiles Protein kinase domain profile. 488 748 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g2164 766 MobiDBLite consensus disorder prediction 256 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2164 Glsi-ChrGlsi02 72127788 72134782 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2164 1 762 MAP Kinase Kinase Kinase AT3G06620 57.868 0.0 903
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Glsi02g2164 PK_Tyr_Ser-Thr 9.4e-65 CL0016