Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2159 ATGCTTCAGGCATTGATGAATCTTCTCTCGCTGTGTTGGAAGCCATTTGGGCGTGGTGCTGAGAATTTCGATTCCATTGGAGTTAACGGGAGCAGTTTCGGTGGTGGGGTCAGTGGAAGAGAAGGTAATGACGGCTTGCTTTGGTTCCGAGATATCGGAAAGCATGGCTCGGGTGATTTCTCGATGGCGGTGGTCCAGGCAAACCAGGTTCTCGAAGACCAGAGCCAGATCGAGTCTGGCCCTTTGGGCACCCTTGTCGGTATATACGATGGTCATGGAGGCCCGGAGGCATCTCGATACGTTTGCGATCACTTTTTTCAGCATTTTAAAGCAATATCGGCCGAGTCAGAGGGAGTTGTGACAACTGAGACCATTGAAAGAGCATTTCGCCAAATAGAAGAGGGGTTCACTGCCCTTGTGTCAGAATTATGGAGTTCTCGACCTAATATTGCTACTGTAGGCTCGTGTTGTCTAGTTGGAGTGATTTTTCGGCAGACCCTATTTGTGGCAAACCTTGGAGATTCCCGTGTTGTATTGGGTAAGAAAGTTGGCAACACTGGAGGTGTTGCTGCAATTCAGCTATCTACTGAACACAATGCAAATGTTGAGGCTGTTAGACAGGAACTTAAAGAACTGCACCCAAATGATCCCCAAATTGTTGTCCTCAAGTACGGAGTGTGGAGAGTAAAAGGTATTATTCAGGTTTCTAGATCTATAGGTGACGTATATATGAAAAATGCACAGTATAACCGGGAACCAATTAATGAAAAATTCCGACTTCCTGAACCAATGAGCATGCCTATCTTGACTGCTAATCCGACTATTATTTCTCATACTCTCCAACCAAATGATTCCTTCCTTATATTTGCATCAGATGGTTTATGGGAGCACTTGAGTAATGAAAAAGCAGTGGATATTGTCAACAGCAATCCACATGCTGGTAGTGCCAAGAGACTGGTGAAGGCTGCCCTTCATGAAGCAGCAAGAAAACGAGAAATGAGATATTCAGACCTCCATAAAATTGACAAGAAAGTCCGACGTCATTTTCATGATGATATAACTGTTATTGTTTTATTCATAAACCACGACCTTGTTTCCGAAGGGGCAGCTCCAGAGCCGCCACTGTCAATTCGATGTGCACTCAATCACTGA 1152 0.4488 MLQALMNLLSLCWKPFGRGAENFDSIGVNGSSFGGGVSGREGNDGLLWFRDIGKHGSGDFSMAVVQANQVLEDQSQIESGPLGTLVGIYDGHGGPEASRYVCDHFFQHFKAISAESEGVVTTETIERAFRQIEEGFTALVSELWSSRPNIATVGSCCLVGVIFRQTLFVANLGDSRVVLGKKVGNTGGVAAIQLSTEHNANVEAVRQELKELHPNDPQIVVLKYGVWRVKGIIQVSRSIGDVYMKNAQYNREPINEKFRLPEPMSMPILTANPTIISHTLQPNDSFLIFASDGLWEHLSNEKAVDIVNSNPHAGSAKRLVKAALHEAARKREMRYSDLHKIDKKVRRHFHDDITVIVLFINHDLVSEGAAPEPPLSIRCALNH 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2159 383 FunFam Probable protein phosphatase 2C 42 50 368 - -
Glsi02g2159 383 ProSitePatterns PPM-type phosphatase domain signature. 85 93 IPR000222 GO:0043169
Glsi02g2159 383 Gene3D - 50 369 IPR036457 -
Glsi02g2159 383 ProSiteProfiles PPM-type phosphatase domain profile. 59 360 IPR001932 -
Glsi02g2159 383 SMART PP2C_4 49 358 IPR001932 -
Glsi02g2159 383 Pfam Protein phosphatase 2C 84 330 IPR001932 -
Glsi02g2159 383 SUPERFAMILY PP2C-like 69 361 IPR036457 -
Glsi02g2159 383 CDD PP2Cc 60 360 IPR001932 -
Glsi02g2159 383 PANTHER PROTEIN PHOSPHATASE 57 358 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2159 Glsi-ChrGlsi02 72049682 72054469 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2159 1 313 PP2C-type Phosphatase Gene Family AT3G17090 69.329 9.94e-157 442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g2159 02 72049682 72054469 Glsi02g2159 02 72049682 72054469 ECH