Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2155 ATGGCGTCATCTCTGATCTCAAACCCAGTGATGAGCACGGATCGGTCACGTGACCCCTCCAAGAGGAAGAAGAAGAAGAAAGCCCAGCTCAAGCATCAGCAAGAAGATCAGAACCATACCAGATGGAAATCCCAAGCCCAGCAGCAAATCTACTCGTCCAAGCTCCACCAAGCCTTATCCAGAGTCAACCTGGGCTCCTCGGGTTCCACTTCCAACGACGCGCCACGCCGCGGGAAAGCAGTTCGCGAAACTGCCGATAGAGTTCTTGCCGTCACTGCCAAGGGGCGGACTCGTTGGAGCCGAGCGATTCTGACCAATCGGCTCAAGCTCAAGTTTCGGAAGCATAAGAGGCAGAGAGTCACGGCGGCCATCAGTACCACTCGGTCGAAGAAGCCGAGAGTGAGCGTTTTCCGGCTGAAGGGGAAGAGCTTACCGGCTGTGCAGAGAAAGGTGAAGTTTCTGGGCCGGTTGGTCCCCGGTTGCCGGAAACAACCGGTGCCGGTGATTTTAGAGGAAGCCATTGATTACATATCGGCGCTTGAAATGCAAGTCCGAGCCATGAGCGCACTCGCTGACCTTCTCTCTGGGTCGTCTACTTCTGGCGCCGGCTCCAGTTCCGCACCACCTGGCTGA 633 0.564 MASSLISNPVMSTDRSRDPSKRKKKKKAQLKHQQEDQNHTRWKSQAQQQIYSSKLHQALSRVNLGSSGSTSNDAPRRGKAVRETADRVLAVTAKGRTRWSRAILTNRLKLKFRKHKRQRVTAAISTTRSKKPRVSVFRLKGKSLPAVQRKVKFLGRLVPGCRKQPVPVILEEAIDYISALEMQVRAMSALADLLSGSSTSGAGSSSAPPG 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2155 210 CDD bHLH_AtIBH1_like 138 191 IPR044549 GO:0006355
Glsi02g2155 210 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 44 194 IPR044660 GO:0006355
Glsi02g2155 210 MobiDBLite consensus disorder prediction 1 48 - -
Glsi02g2155 210 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 151 196 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2155 Glsi-ChrGlsi02 72006450 72007082 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2155 39 209 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06590 57.692 5.94e-57 178