Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2153 ATGGCAAATTCGGCGGCATTTTCCGATGAGATTCCGAGCACGGCTTTTTCCAGCATCTTTGACACGATGGTGGTGCCATCATCATCGTCATGTGATATTGTTGATCAACCTGACAAGGCTAATTCCTTTGGCTTCGTGGAATTGTTGGGTTTCCAAGATTACAGCCCCTCTTTGTTCGATTGGCCCCCCTCCACCACCACCACAACTACCCCAACAACCACCACCATCCTCCTCCACCCTCTTCCGTCGCCGGCGAGCTCCAATGTCCCTGACTCTTCCGAGGTCTTGAACACTACTCCTGGGTCCCCCAATTCCTCTTCGATCTCGTCGTCCTCGAATGAAGCCACCGCCGCCAATAGTAACAGGGACGAACTGCAGTGTAGTAGTAAAGCAGAGGATGAAGATGGAGATGCAACCAAAGGAGACGACCAAGATCAAGAGAAGACTAAGAAACAGCTGAAACCCAAGAAGAGGAACCAAAAGAAGCAAAGAGAACCCAGATTTGCGTTCATGACAAAGAGCGAAGTTGATCACCTAGACGATGGCTATAGGTGGCGCAAGTATGGCCAAAAAGCTGTGAAAAACAGCCCCTATCCCAGGAGCTATTATCGTTGCACCACAGCCGGCTGCGGCGTCAAGAAGCGAGTGGAACGGAGCTCCGATGACCCTTCCGTCGTCGTCACCACCTACGAAGGGCAGCACATCCACCCGAGTCCGGTGACGTCTCGGGCGAGCCTCGGGTTCATGCACGAAGCAGCGGCTCTTGGAGGGTTCGGACCCACGAGTCCACACTTTGGGGTGCCACAACCACACCACCCCCAGCAGCAAGCAGCTTCTTCTTTGTTCTATAGCTCAGCCCCACCTTTGAGTAGTTATAAGGAGTCAACGACGTCGTTTTCTAGCCTACTTCTTCAAGAGAATCATAATCTAGGTTTTGGACCATTGTCGACGACGACGACTAGGTCAGCTCAAGCCTTGTTAAGGGACAATGGGCTCCTTCAGGACATTGTGCCAACGCAGATGAGGAAGGAGGAGAAGGAAGAAGAGGAGGTGAATGATCAAGAGGAAATAGCTTTAGAGCATAGTAATTCATTGTCTTTGTTGCTGGCAAAGGATGATGGTGAGCTAGCTAGGTACGTACGTGTGGGAGATATTTATGGGTTTTCATCATGCCCCATTATTGGAGTTGTAGAACCCTTTGTCCATTTCATATTCCCTTTCCCACCTTGGAAATTTTGTTTAGCAGCTCACGCTGCTTAA 1260 0.5048 MANSAAFSDEIPSTAFSSIFDTMVVPSSSSCDIVDQPDKANSFGFVELLGFQDYSPSLFDWPPSTTTTTTPTTTTILLHPLPSPASSNVPDSSEVLNTTPGSPNSSSISSSSNEATAANSNRDELQCSSKAEDEDGDATKGDDQDQEKTKKQLKPKKRNQKKQREPRFAFMTKSEVDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTAGCGVKKRVERSSDDPSVVVTTYEGQHIHPSPVTSRASLGFMHEAAALGGFGPTSPHFGVPQPHHPQQQAASSLFYSSAPPLSSYKESTTSFSSLLLQENHNLGFGPLSTTTTRSAQALLRDNGLLQDIVPTQMRKEEKEEEEVNDQEEIALEHSNSLSLLLAKDDGELARYVRVGDIYGFSSCPIIGVVEPFVHFIFPFPPWKFCLAAHAA 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2153 419 ProSiteProfiles WRKY domain profile. 174 239 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi02g2153 419 MobiDBLite consensus disorder prediction 62 169 - -
Glsi02g2153 419 MobiDBLite consensus disorder prediction 126 152 - -
Glsi02g2153 419 FunFam WRKY transcription factor 57 165 239 - -
Glsi02g2153 419 Gene3D WRKY domain 164 240 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi02g2153 419 SMART WRKY_cls 179 238 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi02g2153 419 MobiDBLite consensus disorder prediction 62 125 - -
Glsi02g2153 419 Pfam WRKY DNA -binding domain 180 236 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi02g2153 419 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 88 272 IPR044810 GO:0003700
Glsi02g2153 419 SUPERFAMILY WRKY DNA-binding domain 171 239 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi02g2153 419 MobiDBLite consensus disorder prediction 259 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2153 Glsi-ChrGlsi02 71960801 71963499 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2153 1 344 WRKY Transcription Factor Family AT5G49520 43.370 1.45e-58 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Glsi02g2153 WRKY 2.3e-26 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g2153 02 71960801 71963499 Glsi02g2153 02 71960801 71963499 ECH