Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2112 ATGATTGTGAGCCAGAAGATGGTGGCCGAAGCGGAAATTATCTGTCGGAAGAGCATTCCTGTGTTGGATGTGAAGTATCGTCTTTGCGTAGCAGAAGAACACAACGTCAAGGTTGAGGTTTCACCTACCTCGCCTTCTGTCCCGGTCTTTGGCCAAGTACGCGTTTCTTCTGAATATATTTATACTGAAACGTGTCGATTTGAAACGGAGGCGAGTTGCTCTGAGATCATCGAAGAACCAATCTTAGAGATCTCCCCAACCAAGGTCATCCCAAATGTCCGATCTGGTTGCTATGCTGACATTGGACCCCGAGGATCTATGGATGATGAACACATTCAAATTGATGATCTAGCTGCACACCTTGGATTTGTGTTTAAGTACCCTATAAGAAGTGCATTTTATGCAGTTTTTGATGGTCATGGAGGGCCTGATGCAGCCTCTTTTATTAAGAGGAATGCTATGAGATTATTTTTTGAAGATGCTAATCTGCTTCAGTCATATGATACTGATGCATTTTTTCTAAAGAAGTTGGAGGATTCTCATCGGAAAGCTTTTTTACTTGCAGACCGTGCCTTGGCTGACGAAGAAACTGTTAATAGTTCCTGTGGGACAACAGCATTGACTGCCCTTGTACTTGGAAGGCATTTACTGGTTGCAAATGCTGGTGATTGTCGGGCAGTTCTCTGCAGAAGAGGAGTAGCTGTTGAGTTGTCTCAAGATCATAGGCCTAGTTATTTACCAGAACGAAGAAGAGTGGAGGAGTTAGGTGGTTTCGTTGATGATGGGTATCTCAATGGTTATCTCTCTGTTACTCGAGCCCTTGGGGATTGGGACTTAAAATTCCCACTTGGTTCTGCATCACCTCTTATTGCTGATCCAGATGTTCAACAGGTTACGTTGACAGAGGATGACGAGTTCTTGATAATTGGGTGTGATGGGATATGGGATGTTTTGTCAAGCCAAGATGCAGTTAGTCTTGTCCGCCGAGGGTTAAAAAGGCATGATGACCCTCAGCAATGTGCTAGAGAGCTAGTCAAGGAAGCACTGCGCTTAAATACATCTGATAATCTCACTGCGATTGTTATATGCTTGTCCTCCATTGAAAGCATTGTTGAATCATGTCCACCCCAAAGGCAAAGACATAGAGCTTGCTGTCTGTCCGAAGAGGCCCGTAACAGATTGAAGAGCTTGCTGGAGGGCAATTGA 1206 0.4436 MIVSQKMVAEAEIICRKSIPVLDVKYRLCVAEEHNVKVEVSPTSPSVPVFGQVRVSSEYIYTETCRFETEASCSEIIEEPILEISPTKVIPNVRSGCYADIGPRGSMDDEHIQIDDLAAHLGFVFKYPIRSAFYAVFDGHGGPDAASFIKRNAMRLFFEDANLLQSYDTDAFFLKKLEDSHRKAFLLADRALADEETVNSSCGTTALTALVLGRHLLVANAGDCRAVLCRRGVAVELSQDHRPSYLPERRRVEELGGFVDDGYLNGYLSVTRALGDWDLKFPLGSASPLIADPDVQQVTLTEDDEFLIIGCDGIWDVLSSQDAVSLVRRGLKRHDDPQQCARELVKEALRLNTSDNLTAIVICLSSIESIVESCPPQRQRHRACCLSEEARNRLKSLLEGN 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2112 401 Pfam Protein phosphatase 2C 104 356 IPR001932 -
Glsi02g2112 401 PANTHER PROTEIN PHOSPHATASE 2C 79 362 IPR015655 GO:0004722|GO:0006470
Glsi02g2112 401 ProSiteProfiles PPM-type phosphatase domain profile. 94 364 IPR001932 -
Glsi02g2112 401 Gene3D - 84 369 IPR036457 -
Glsi02g2112 401 SUPERFAMILY PP2C-like 88 365 IPR036457 -
Glsi02g2112 401 SMART PP2C_4 84 362 IPR001932 -
Glsi02g2112 401 ProSitePatterns PPM-type phosphatase domain signature. 133 141 IPR000222 GO:0043169
Glsi02g2112 401 SMART PP2C_SIG_2 109 364 IPR001932 -
Glsi02g2112 401 FunFam Probable protein phosphatase 2C 22 79 367 - -
Glsi02g2112 401 CDD PP2Cc 93 364 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2112 Glsi-ChrGlsi02 71477080 71478932 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2112 1 400 PP2C-type Phosphatase Gene Family AT1G48040 58.065 5.21e-151 431
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g2112 02 71477080 71478932 Glsi02g2112 02 71477080 71478932 ECH