Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2103 ATGGCTATAGAAGCTGAGGCCACAACTACTCCAGAGTTGGCGCTGGCTGATACAGATATCAACTGGGACAGGTTGGATAAGACCAAGTTTCACGTCATTGGTGCCATACTCTTTACTGCTCAATCAGCCTTGCTTCATCCAACAGCAGTGGTAAAGACAAGAATGCAAATAGCGGGATCTGGACTCTCTCCCATGAGAGGAACATCAGTATTTACTCGCATATTGAAAAGTGATGGTATTCCTGGACTATTTAGAGGTTTTGGTACTTCTGCTGTTGGATCATTACCTGGTAGGGTCCTAGCTCTGACATCACTTGAGATGTCAAAAGACTTTATGTTGAAATACACTGAAAATTTTGACATGCCAGAAGCATCGCGTATTGGTCTTGCCAATGGAGTGGCTGGCATGTTCTCAAATCTAGTTTCTTGTGTATACTTTGTGCCTTTGGATGTGATCTGCCAGAGGTTAATGGTACAAGGTCTACCTGGAACTACATACTGCAATGGAGCATTTGATGTTGTTCGTAAAGTTATGAAGGCTGAGGGTTTTCGTGGCTTGTATAGAGGTTTTGGATTAACAGCTGTAACCCAGTCACCAGCATCTGCACTTTGGTGGGGTTCATATGGTGCAGCACAGCACATTATTTGGAGGAGTTTGGGCTATAGAGATGACATGGAGAAAAAACCTTCACATATGGAAATGGTAACTGTCCAGGCTACAGCAGGGATGGTGGCTGGTGCTTGTTCCTCTGTTATAACTACCCCCATTGATACTGTTAAAACACGACTTCAGGTTATGGACAACTGTGATGTTGGAAGACCATCAGTACTAAAGACAACAAAGGCGCTCCTCAAGGAAGATGGATGGTGGGGATTTTACAGGGGATTTGGACCTCGTTTTTTAAATATGTCACTTTATGGAACAACAATGATTGTTACTTATGAACTGATAACTAAGCTTGATGTTTTCTTTCTTTGTCTCCCTTTTAATAGAAAGATTATCGATACAACCAAGTCTGAGATCTTTCACTTGAAGAAGTGCGATGAAGCCATATCTGAAAGATGTTTTTGCTCTGGTTCTTCTATAACTTTGATGAGCAAAGGTTTGCAGAGGCATTTGCCGGATCCCATTGGCGTATTGCATTTAGGAATGGAAAGGGTTATAAACTATGGTCAGTTGCATCGCAAGTGA 1191 0.4223 MAIEAEATTTPELALADTDINWDRLDKTKFHVIGAILFTAQSALLHPTAVVKTRMQIAGSGLSPMRGTSVFTRILKSDGIPGLFRGFGTSAVGSLPGRVLALTSLEMSKDFMLKYTENFDMPEASRIGLANGVAGMFSNLVSCVYFVPLDVICQRLMVQGLPGTTYCNGAFDVVRKVMKAEGFRGLYRGFGLTAVTQSPASALWWGSYGAAQHIIWRSLGYRDDMEKKPSHMEMVTVQATAGMVAGACSSVITTPIDTVKTRLQVMDNCDVGRPSVLKTTKALLKEDGWWGFYRGFGPRFLNMSLYGTTMIVTYELITKLDVFFLCLPFNRKIIDTTKSEIFHLKKCDEAISERCFCSGSSITLMSKGLQRHLPDPIGVLHLGMERVINYGQLHRK 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2103 396 ProSiteProfiles Solute carrier (Solcar) repeat profile. 26 111 IPR018108 -
Glsi02g2103 396 Gene3D Mitochondrial carrier domain 32 322 IPR023395 -
Glsi02g2103 396 ProSiteProfiles Solute carrier (Solcar) repeat profile. 233 320 IPR018108 -
Glsi02g2103 396 ProSiteProfiles Solute carrier (Solcar) repeat profile. 126 214 IPR018108 -
Glsi02g2103 396 SUPERFAMILY Mitochondrial carrier 23 316 IPR023395 -
Glsi02g2103 396 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 11 320 - -
Glsi02g2103 396 Pfam Mitochondrial carrier protein 33 115 IPR018108 -
Glsi02g2103 396 Pfam Mitochondrial carrier protein 237 319 IPR018108 -
Glsi02g2103 396 Pfam Mitochondrial carrier protein 130 216 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2103 Glsi-ChrGlsi02 71165164 71168932 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2103 17 320 Chloroplast and Mitochondria Gene Families AT5G15640 50.000 2.77e-105 311