Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2091 ATGGAGGCTAAATTTAGGGGTAAGAATCAGTATGTTTATGGACCGGTGGTACAGGAAATGAAGGCGGTTGGGAATAGGAGTTTGGAGTGGAATTTGGAAGACTGGAAATGGGACGGCGATCTTTTCACTGCTAGTCCATTAAATTCCGTTCCATCTGATTGTAGGAATCGGCAGTCTTTCCCAGTTGATCCTGAAATTCCTTCAAAAGCTAATACGTCTAACAGTTTATCTTCTAATTGGGATGATGCCAGCCGAGATAAAGGAAAGAGAGAATTGGAAAAAAGGAGGAGAGCTGTTATAGCTGAAGGGGAGGAGCCGAGTGATGAAACTGGCTGTCTTAATTTAAACCTTGGGGTCCAAATTTACCCTATCACGGAAGGAGAGGAAAAAAGTGGAAAGAAAACGAAGATAGTTGGGACTACTTCAAACCGTGCTGTTTGTCAGGTGGAAGATTGTAGGGCTGATCTTAGTAATGCAAAGGATTACCACCGTCGGCATAAGGTTTGTGATATGCATTCCAAGGCTAGTAAGGCTCTGGTGGGAAATGTTATGCAGCGTTTCTGTCAACAGTGTAGCAGGTTTCATATTCTTCAAGAGTTTGATGAAGGGAAGAGAAGTTGTCGTAGGCGTTTGGCAGGCCACAATAGGAGGAGGAGGAAGACGCATCCTGATGCTGTAGTTAATGGAGGCTCCCTAAATGATGAAAGGGGTAGTAGCTATCTGTTAACGAGTCTTCTCCGTATACTGTCCAATATGCATTCAAATGGCTCAGATCATGCAAGGGACCAGGATATTCTGTCTCATCTGCTAAGGAACCTGGCAAGTCTGGCTGGTACAATTAATGGAAGGAACATAGCCTCCTTATTGGAGGGTTCCCAAGGTTTGGCGAATGCTGGTACATCTGGAGCTGTGCAGAAGGTGCCTAATCTAAATTCAAATGGTCCTGAACCCTTCAGGCCTTCTGGTTCTTCCATCAAGATGGATGATGGTCCTAGCAGTCTGGACCCTCCAAGGTCTATGGGACAGTGTGAGACAGTGCCTACTTATGGTATGGGACAAAAATGTTTACCTTCAGGTGATGATGGAGTACGGAGTTTAAATTCTCCTTCAGGACCACAGCCCTCAAATTTGTTTGTGTCAAGGGATAGCCTTCCTCCCCAAATTTTTGCAGCAGAGGCTACTGTTGGAAGGAATGGCTTAAATAACATTGACCTGAATAATGTATATGATGACATGCAGGATGATGATGAGAACCTGAGTAAGTCTCATCCTCCTGTGGCTTCAGGGATTGGGTCTCTTAATCATCCTTCATGGTTGCAGCTTGAGTCTCACAAGTCCAGTCCACCACAGACAAGCAGAAACTCAGATTCAACGTCTACCCAGTCACCTTCTAGTTCTAGCGGAGAAGCTCAGAGTCGCACAGATCGAATTGTTTTCAAACTCTTTGGAAAGGATCCAAATGATTTTCCCCATGTTCTCCGATCACAGATTCTTAGCTGGTTATCCCACAGTCCCACAGAGATAGAGAGCTACATAAGGCCAGGCTGTATTGTATTAACCATATATCTCTCTCTAGAAAAATCTGCATGGGAGGAGCTCTGCTGTAACCTGGGATCCAACTTGAGAAAGCTTCTTGCTTCATCAAATGATTCTTTCTGGAGGACAGGATGGGTATATACAAGGGTGCGGCACTCCGTAGCTTTTCTGTACAATGGTCAGGTTGTCTTAGATGTTCCCTTGCACCTCCGAAGCCCGCAACATTGTAGGATTTCATGCATTAAACCACTTGCTGTTTCTGCAAATGCAAGCACTCAATTTATTGTGAAAGGTTTTAACCTTTTCCGATCTAGCACCAGGTTACTCTGTGCACTTGAAGGGAAGTATCTGGTACAGGATAGTTGTTGTGACTTGATTGATGGTGCCGATGCAGCTATAGAACATAATGAGCTTCAGCGCCTTAGCTTCTCTTGTCATATGCCAAATGTAACCGGGAGGGGATTTATTGAGGTGGAAGACCATGGTCTTAGCAGCTGTTCCTTTCCTTTTATAGTTGCAGAGCCAGAAATTTGTTCAGAGATCTGTAATCTGGAGAGTGTGATTGAGGCAGCTGAGATTTGTAAAGACATTCAGATAAGAAGCAAACAAATGGAAGAAAAGACTCGAGCCTTGGATTTCATACATGAAATGGGTTGGCTTCTTCATAGAAGTCGAATGAAAGTAAGGTTGGGTCCCATGGCACCTGTGCAGGACCTCTTCGATTTCAATCGGTTCACGTGGCTTGTTGACTTCTCCATGGACCATGATTGGTGTGCCGTGATTAAAAAGCTTTTGGACATTCTGTTTGAGGGTACTGTTGATGCAGGAGAGCATACCTCCATTGAGCTTGCACTGTTAGACTTGGGTCTTCTACACACAGCTGTAAAGAGAAAGTGCAGGCCTATGGTGGAACTACTGTTGAGATTTGTGCCAGTTCAAACTTCAGATGGCACAGACAGTAAGGAGAAGCAAGTTGACAAGCACTCCGACAGATTCTTATTTAAACCTGACACTGTTGGACCTGCTGGTTTGACTCCCCTTCATGTTGCAGCAAGTATGAATGGCTCCGAGAATATATTAGATGCATTAACCGATGATCCAGGAATGGTGGGAATCAAGGCATGGAAAAGTGCCCGGGACAATGCCGGTTTGGCACCCAACGACTATGCACAAATGCGGGGCTACCATTCCTACATTCAACTTGTCCAGAGAAAATCGAGCAAGAAAAGTGAAAGCGAACATGTTGTGCTTGATATCCCTGCCGGTACCCTTGTAGATAGTAACACAAGGAAGAAGCAATTAGATCGGCAGCATAGGCCATCATCGAAAGTTTCGAGTTTGCATACTGACAATATTGAAATGGCAGTAATTCCACGTCACTGTGAACTATGCCAGCACAAGCTGGCTTATAATAGCATGAGAAGTGCAGCACTGGTTTATAGGCCAGCAATGCTCTCAATGGTGGCCATTGCAGCTGTCTGTGTGTGTGTGGCTTTGCTCTTCAAAAGCTCACCCAGAGTTTCTTATGTGTTCCAGCCCTTCAGCTGGGAATCATTGGACTATGGCTCAATTTAG 3111 0.4478 MEAKFRGKNQYVYGPVVQEMKAVGNRSLEWNLEDWKWDGDLFTASPLNSVPSDCRNRQSFPVDPEIPSKANTSNSLSSNWDDASRDKGKRELEKRRRAVIAEGEEPSDETGCLNLNLGVQIYPITEGEEKSGKKTKIVGTTSNRAVCQVEDCRADLSNAKDYHRRHKVCDMHSKASKALVGNVMQRFCQQCSRFHILQEFDEGKRSCRRRLAGHNRRRRKTHPDAVVNGGSLNDERGSSYLLTSLLRILSNMHSNGSDHARDQDILSHLLRNLASLAGTINGRNIASLLEGSQGLANAGTSGAVQKVPNLNSNGPEPFRPSGSSIKMDDGPSSLDPPRSMGQCETVPTYGMGQKCLPSGDDGVRSLNSPSGPQPSNLFVSRDSLPPQIFAAEATVGRNGLNNIDLNNVYDDMQDDDENLSKSHPPVASGIGSLNHPSWLQLESHKSSPPQTSRNSDSTSTQSPSSSSGEAQSRTDRIVFKLFGKDPNDFPHVLRSQILSWLSHSPTEIESYIRPGCIVLTIYLSLEKSAWEELCCNLGSNLRKLLASSNDSFWRTGWVYTRVRHSVAFLYNGQVVLDVPLHLRSPQHCRISCIKPLAVSANASTQFIVKGFNLFRSSTRLLCALEGKYLVQDSCCDLIDGADAAIEHNELQRLSFSCHMPNVTGRGFIEVEDHGLSSCSFPFIVAEPEICSEICNLESVIEAAEICKDIQIRSKQMEEKTRALDFIHEMGWLLHRSRMKVRLGPMAPVQDLFDFNRFTWLVDFSMDHDWCAVIKKLLDILFEGTVDAGEHTSIELALLDLGLLHTAVKRKCRPMVELLLRFVPVQTSDGTDSKEKQVDKHSDRFLFKPDTVGPAGLTPLHVAASMNGSENILDALTDDPGMVGIKAWKSARDNAGLAPNDYAQMRGYHSYIQLVQRKSSKKSESEHVVLDIPAGTLVDSNTRKKQLDRQHRPSSKVSSLHTDNIEMAVIPRHCELCQHKLAYNSMRSAALVYRPAMLSMVAIAAVCVCVALLFKSSPRVSYVFQPFSWESLDYGSI 1036
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2091 1036 Gene3D - 138 208 IPR036893 GO:0003677|GO:0005634
Glsi02g2091 1036 ProSiteProfiles Zinc finger SBP-type profile. 144 221 IPR004333 GO:0003677
Glsi02g2091 1036 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 84 913 IPR044817 GO:0003677
Glsi02g2091 1036 MobiDBLite consensus disorder prediction 65 81 - -
Glsi02g2091 1036 Gene3D - 787 930 IPR036770 -
Glsi02g2091 1036 MobiDBLite consensus disorder prediction 303 319 - -
Glsi02g2091 1036 MobiDBLite consensus disorder prediction 433 472 - -
Glsi02g2091 1036 FunFam Squamosa promoter-binding-like protein 14 138 208 - -
Glsi02g2091 1036 MobiDBLite consensus disorder prediction 303 380 - -
Glsi02g2091 1036 SUPERFAMILY SBT domain 145 226 IPR036893 GO:0003677|GO:0005634
Glsi02g2091 1036 SUPERFAMILY Ankyrin repeat 797 913 IPR036770 -
Glsi02g2091 1036 MobiDBLite consensus disorder prediction 363 380 - -
Glsi02g2091 1036 MobiDBLite consensus disorder prediction 53 92 - -
Glsi02g2091 1036 Pfam SBP domain 147 220 IPR004333 GO:0003677
Glsi02g2091 1036 MobiDBLite consensus disorder prediction 211 232 - -
Glsi02g2091 1036 MobiDBLite consensus disorder prediction 408 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2091 Glsi-ChrGlsi02 71050772 71058505 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2091 171 1035 SBP-box Gene Family AT2G47070 47.011 0.0 692
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Glsi02g2091 SBP 8.5e-29 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g2091 02 71050772 71058505 Glsi02g2091 02 71050772 71058505 ECH