Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2077 ATGGTGATCATAAATCTTGGGAAGAGGAACGAGAAGGAGAAGCAGGGGCAGGGAATGCGACTTGGGAAATACGAGTTGGGTAGGACTCTGGGCGAAGGCAATTTTGGAAAAGTGAAATTGGCGAAGAACACAGATTCCGGGCAACCTTTTGCGGTGAAAATCCTTGAGAAGAAAAAGATCATTGACCTCAATATAGCCGATCAGATAAAGAGGGAAATAGCCACCTTGAAGCTCCTGAAGCATCCAAACGTTGTCAGATTACACGAGGTGTTGGCGAGCAAAACCAAGATTTATATGGTCCTAGAGTACGTGACTGGAGGAGAATTGTTTGACAGAATTGCAACCAAGGGTAAACTTGCAGAAGCCGGAGGAAGGAAGCTGTTCCAACAGTTGATTGACGGTGTTAGCTACTGTCACAATAAAGGGGTGTTCCACAGGGATCTCAAGCTAGAGAATATTCTTGTGGATGCCAAAGGGAACATAAAGATAACCGATTTTGGCCTTAGTGCTTTACCTCAGCATTTGAAGGCAGATGGTTTGCTGCACACCACCTGTGGAAGTCCCAACTATGTTGCTCCTGAGATTCTTGCTAATAGAGGCTATGATGGTGCAACATCAGATACGTGGTCATGTGGTGTTATATTGTATGTTATTTTAACAGGATATCTTCCATTCGATGATCGAAATCTTGCGGTTCTCTATCAAAAGATTTTAAAAGGAGATGTTCAGATACCAAAATGGCTATCACCTGGTGCCCAGAATATGATAAAGAGGATTCTTGATCCCAACCCTGTTACTCGGATAACAATGGCTGGCATCAAAGAAGACGAATGGTTCAGGCAGGACTATATTCCTGCAAATCCAGAGGATGAGGAAGAGGATGTATATATTGACGATGAAGCTTTTTCCATCCATGAATTGCAACATGAAGCAGAACAGAAGAGTCCAGGATCACCAACCCTCATCAATGCATTTCAATTGATAGGGATGTCTTCCTGCCTAGACCTCTCTGGCTTCTTTGAGAAAGAGGATGTCTCGGAGAGGAAGATAAGATTTACTTCGAACCATTCCGCGAAAGACCTGATTGAGAGGCTTGAGGACATCGTAACAGAAATGGGATTTAAAGTACAGAAGAAAAATGGAAAATTGAAAGTGATACAAGAGAACAGGGCGCATAAAAGTCTAGGTTGCCTCTCAGTGGCAGCAGAGGTTTTTGAAATAAGCCCATCATTGAATGTGGTAGAGTTAAGGAAATCTCAAGGAGATTCTTCAGTATATAGACAGTTGTGCAACAAGTTGTCAAATGATTTGGGCGTTCCCCCAAAGTCAAGAAGTAGTGAGCTCCTAAGTGGATAG 1356 0.4299 MVIINLGKRNEKEKQGQGMRLGKYELGRTLGEGNFGKVKLAKNTDSGQPFAVKILEKKKIIDLNIADQIKREIATLKLLKHPNVVRLHEVLASKTKIYMVLEYVTGGELFDRIATKGKLAEAGGRKLFQQLIDGVSYCHNKGVFHRDLKLENILVDAKGNIKITDFGLSALPQHLKADGLLHTTCGSPNYVAPEILANRGYDGATSDTWSCGVILYVILTGYLPFDDRNLAVLYQKILKGDVQIPKWLSPGAQNMIKRILDPNPVTRITMAGIKEDEWFRQDYIPANPEDEEEDVYIDDEAFSIHELQHEAEQKSPGSPTLINAFQLIGMSSCLDLSGFFEKEDVSERKIRFTSNHSAKDLIERLEDIVTEMGFKVQKKNGKLKVIQENRAHKSLGCLSVAAEVFEISPSLNVVELRKSQGDSSVYRQLCNKLSNDLGVPPKSRSSELLSG 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2077 451 ProSitePatterns Protein kinases ATP-binding region signature. 30 53 IPR017441 GO:0005524
Glsi02g2077 451 FunFam Non-specific serine/threonine protein kinase 319 440 - -
Glsi02g2077 451 SUPERFAMILY Protein kinase-like (PK-like) 21 312 IPR011009 -
Glsi02g2077 451 ProSiteProfiles NAF domain profile. 317 341 IPR018451 GO:0007165
Glsi02g2077 451 FunFam Non-specific serine/threonine protein kinase 15 103 - -
Glsi02g2077 451 Gene3D Phosphorylase Kinase; domain 1 7 103 - -
Glsi02g2077 451 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 13 422 - -
Glsi02g2077 451 Gene3D Kinase associated domain 1, KA1 317 439 - -
Glsi02g2077 451 CDD CIPK_C 323 434 - -
Glsi02g2077 451 FunFam Non-specific serine/threonine protein kinase 17 319 - -
Glsi02g2077 451 Gene3D Transferase(Phosphotransferase) domain 1 104 304 - -
Glsi02g2077 451 SMART serkin_6 24 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g2077 451 Pfam NAF domain 319 378 IPR004041 GO:0007165
Glsi02g2077 451 ProSiteProfiles Protein kinase domain profile. 24 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g2077 451 Pfam Protein kinase domain 24 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g2077 451 ProSitePatterns Serine/Threonine protein kinases active-site signature. 143 155 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2077 Glsi-ChrGlsi02 70879751 70885845 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2077 87 439 CBL-interacting serine-threonine protein kinases AT3G17510 74.294 0.0 521
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Glsi02g2077 Pkinase 1.2e-71 CL0016