Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2054 ATGGAAGGGAAAGTTTCAGAAAAGAATTTGCTGGAAGCTGAGGAAAGGCCATCAGACAGATATGATAATAATAGGGATGCACCGCAGAGGAACGAGGAAACCTCCATTAACAATACTCTAGATTTCACTTCCCTCAGTTTGAGCCTAAATAACTCAGAACAAGACCATAAAAATCAAGAGCAGCCCTTAACCCAAGCAGGCTTGCTGCGAATTAAGCTAGAGGAAGCGAAGAAGGAGAATCAGAATTTAAGAGCTATGCTAAATCAGATTACTGAAAGCTACACTGCTCTTCAGAACCACCTACTTTTGGCGATGCAGAAGCAGCAACCATCATCACAACCTAGAAATTATTATGACATGCAGAAGCTGAAGAGACAAGATGTCATAGAGAAACCAGTGTTGCCCACTTGGAAGTTCTTAGATATCGGTTGGCCTTCACCTTCAGAAGGATTTGCTTCTGAAAGATTCAATGAGAAAAACATAGGCAGCAAACTTTCATCTGCCTGCATTGTTGAAGGTGATTATATCAATAACCAAATAACACCAGAAGGAGCTAAAAGCATAGCAGATCAAGCATCTGAGGCATCTGGCAGGAAAGCTAGGGTTTCCATAAGGGCACGATCAGATTTTTCTTTGATGGGTGATGGGTGTCAATGGAGAAAGTATGGACAAAAGACGGCAAAGGGAAACCCTTGTCCCCGGGCTTACTATCGTTGCAGCATGGGAACTGCGTGTCCAGTTCGTAAGCAGGTGCAAAGGTGTGCTAAGGATGATACTGTACTCATTACAACCTATGAAGGGAACCATAATCATCCACTCCCACCAGCAGCCAGATCCATGGCAAGCACAACATCAGCAGCATTGAACATGTTCCTTTCTGGCTCAACCACTAGTACTACTGCACATGGTAGCACACTACCAAATTTAGGCCTCTTCCCTTCATTATCTGGTTCTGTTTCCACTGGCTTGGCTAGCTTCTCTCCATCTGCATCATGTCCTACAATAACACTGGACTTAACCCTGCCATCTAATAACTCCTTGCAATTCCAAAGGGCTACCTCACTAAACCACTGCCAATCATTCCCTTTGCCATTGCATGGATGCAGTCGACAAAGTGAGGGGCTGAACTTGTATTCTAAGTCTCCAACTGTGACAACCCCCGAGAACAACCTTCTCTTGGCGGATTTAGTTGGTGAAGCTATAGCCAAAGATCCTTCTTTCAAGGCAGCATTTGTTGCAGCCGTTTCCTCATTCACTGGAGCCACTCAGAACCTTAATAGCCACAACCAAGTTAGTGAGAGTGGGCATGAACCCTCTTCCAACATGCCTGCACTACTGCATCAGTCCTGCACCACTGGATTGATCTAG 1368 0.4481 MEGKVSEKNLLEAEERPSDRYDNNRDAPQRNEETSINNTLDFTSLSLSLNNSEQDHKNQEQPLTQAGLLRIKLEEAKKENQNLRAMLNQITESYTALQNHLLLAMQKQQPSSQPRNYYDMQKLKRQDVIEKPVLPTWKFLDIGWPSPSEGFASERFNEKNIGSKLSSACIVEGDYINNQITPEGAKSIADQASEASGRKARVSIRARSDFSLMGDGCQWRKYGQKTAKGNPCPRAYYRCSMGTACPVRKQVQRCAKDDTVLITTYEGNHNHPLPPAARSMASTTSAALNMFLSGSTTSTTAHGSTLPNLGLFPSLSGSVSTGLASFSPSASCPTITLDLTLPSNNSLQFQRATSLNHCQSFPLPLHGCSRQSEGLNLYSKSPTVTTPENNLLLADLVGEAIAKDPSFKAAFVAAVSSFTGATQNLNSHNQVSESGHEPSSNMPALLHQSCTTGLI 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2054 455 SMART WRKY_cls 213 273 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi02g2054 455 Coils Coil 66 100 - -
Glsi02g2054 455 MobiDBLite consensus disorder prediction 426 455 - -
Glsi02g2054 455 MobiDBLite consensus disorder prediction 1 38 - -
Glsi02g2054 455 FunFam probable WRKY transcription factor 31 198 275 - -
Glsi02g2054 455 Pfam WRKY DNA -binding domain 215 272 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi02g2054 455 MobiDBLite consensus disorder prediction 1 29 - -
Glsi02g2054 455 Gene3D WRKY domain 197 275 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi02g2054 455 ProSiteProfiles WRKY domain profile. 208 274 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi02g2054 455 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 47 430 IPR044810 GO:0003700
Glsi02g2054 455 SUPERFAMILY WRKY DNA-binding domain 206 274 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2054 Glsi-ChrGlsi02 70524459 70528560 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2054 69 340 WRKY Transcription Factor Family AT4G04450 41.613 5.10e-67 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Glsi02g2054 WRKY 4.9e-23 CL0274