Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2035 ATGGATGGAAAACTTGACACTGATGGGGTCAAGCCCGAGACACAGCAAGGTGCCGGAGGAGAAAAAGACCAAGTCTTGGTTCCAGAATCTTCTCCTGTTTCTGTGAATTCTGGGTGTAAAAATGATGATGAGGTTGTTAGCAACGGAGAGGAATCGACGATGGGAGAAGGGGGAGAGGCTGATGAAAAATCAACTGGAGATTTATTGGGAAAGAAGCTGGTGCAGAACAACGTGGGTGGTGTGCCGATGATGCATGTCTCTGAAAACAGGTCAATGCCACCATCTGGACTCAATACAGCGATTCCTAGTACAAATCAGCTTACCATCTTCTTTAATGGGAGTGTTTGTGTCTATGAAGGAATTCCTGCAGAAAAGATGCATGAAATAATGCTTATTGCTGCTTCTGCTGCTAAGTCTGCTGACATAAAGAGTGGGATACAATCCCCCTTTACTTCACCGGTTCCCACTAGGTCACCTTCTCCACAGGGAGCCACTAAGAATTTGACTTCAACACAAGCACTCTGCTTTCCTACACAGAAGAGTTCCATTTGTGGGCTGCAAGAATTTCCAATTGCACGCCGACATTCGCTTCAGCGATTTCTTGAGAAGCGACGAGATAGGTTGGGGAGCAAAGGCCCATATCCTACCCCATCACCAACAAAAGTGGCTGACAACACAGAAAACAGCTTTAGTGCTGATAATGCACCAGATCTGGTTTCCTTCAAGCTTTCAGAGGAGGAATTCCAGCCAAGTATCACTGCCTCATAA 768 0.4609 MDGKLDTDGVKPETQQGAGGEKDQVLVPESSPVSVNSGCKNDDEVVSNGEESTMGEGGEADEKSTGDLLGKKLVQNNVGGVPMMHVSENRSMPPSGLNTAIPSTNQLTIFFNGSVCVYEGIPAEKMHEIMLIAASAAKSADIKSGIQSPFTSPVPTRSPSPQGATKNLTSTQALCFPTQKSSICGLQEFPIARRHSLQRFLEKRRDRLGSKGPYPTPSPTKVADNTENSFSADNAPDLVSFKLSEEEFQPSITAS 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2035 255 Pfam Jas motif 190 214 IPR018467 -
Glsi02g2035 255 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 78 227 IPR040390 -
Glsi02g2035 255 MobiDBLite consensus disorder prediction 205 234 - -
Glsi02g2035 255 MobiDBLite consensus disorder prediction 1 68 - -
Glsi02g2035 255 SMART tify_2 100 135 IPR010399 -
Glsi02g2035 255 MobiDBLite consensus disorder prediction 29 43 - -
Glsi02g2035 255 MobiDBLite consensus disorder prediction 219 234 - -
Glsi02g2035 255 MobiDBLite consensus disorder prediction 147 166 - -
Glsi02g2035 255 Pfam tify domain 102 134 IPR010399 -
Glsi02g2035 255 ProSiteProfiles Tify domain profile. 100 135 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2035 Glsi-ChrGlsi02 70260831 70264264 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2035 97 216 Tify Gene Family AT5G20900 52.846 1.48e-31 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Glsi02g2035 tify 2.6e-14 No_clan