Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2033 ATGGGTTTCTGTGTTGAAGATCCATTTTTGGGATTGGCGACAAGTCAGGCAATATACGATGCGGCTGTGATAATCGCGGTTCTGAGATGGGTTTTGTGCTGGGTATACAGAATCATCAAAGACAGAAGAAGGGCTAGATCTCTTGAGATTGAGACCCCTAATGATCCCTCTTCTTCTTCTTCTTCTTCATGGGTTTCTTCCACTGCTCTGATAGTGACGACTTTCGGTGAGATTGTGGAGAAACTGCCACAGACAGAGGACACTTGCGCTGTGTGCCTGAACCAGATGAGAATGGAAGACGAGGTTAGGGAGCTCATGAATTGCTACCATGTCTTCCATAGGGAATGCATAGACAAATGGTTGGATCATGATAATGAAGACAATCACAACCCCAACCCCAGTTGCCCACTTTGCAGAGCGCCTTTGCTGATGACGACTTCTTCATCTTGTTGCCCATCGGAAAGCTCTAGTAGTTGGGTGTCACCCCCTCAGCCTAGTTGGGCTGTGGAGAGACTTCTCTATCTCTTTGGGGATGATCTGTGCTATATTGATTCTGCGTAG 561 0.4706 MGFCVEDPFLGLATSQAIYDAAVIIAVLRWVLCWVYRIIKDRRRARSLEIETPNDPSSSSSSSWVSSTALIVTTFGEIVEKLPQTEDTCAVCLNQMRMEDEVRELMNCYHVFHRECIDKWLDHDNEDNHNPNPSCPLCRAPLLMTTSSSCCPSESSSSWVSPPQPSWAVERLLYLFGDDLCYIDSA 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2033 186 PANTHER RING ZINC FINGER PROTEIN-RELATED 22 177 - -
Glsi02g2033 186 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 51 143 IPR013083 -
Glsi02g2033 186 SUPERFAMILY RING/U-box 80 145 - -
Glsi02g2033 186 SMART ring_2 89 138 IPR001841 -
Glsi02g2033 186 ProSiteProfiles Zinc finger RING-type profile. 89 139 IPR001841 -
Glsi02g2033 186 Pfam Ring finger domain 87 139 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2033 Glsi-ChrGlsi02 70235780 70236340 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2033 1 180 C3H Transcription Factor Family AT5G20885 45.745 9.00e-46 147