Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2024 ATGGTAGAAGCTGTAGTAGTCACAGTGGGTGGTTGCCAAGGACAAGATGCCCTCCAGATTAGCATCATGGATTTGCAGCAGCAGCAGCAAGAGACTCACCTCTTCCAAGTTCCTATGGCTGTTTCTTCAACAAAAGAGCTGTCACGAACACCCAGTATCACATTCATCTTCTTGTTGATCCTGATTCTGGGTCAGTGCACCCCATTTGGTGATAGCGCTCGCAGTGATTTCAGGGTGTCAAAGTGCTTGACAGTTTCTGCTCCGGAGTTCCTTCAAGTTATGGAACAAACCATTGATACTTTGCACCAGGTTGCCTCGAAATTGGGGCAGTTTTCCAACGTCTTCAGCGATTTTCGTCTCTCCAATGCCATTTCCGACTGCCTCGATTTGTTTGATTTGTCTTTTGATGATCTCAACTGGGCTGTCTCTGCCACTGAGAATCCCGGAGGAAAGCATAACAGCACAGGAAACTTAAGCTCAGATTTGAGGACATGGCTAAGTGCTGCACTTTCACATCCACAGACATGCATGGACGGATTCGAAGGTACCAATAGCATTGTGAAAGGTATAGTATCATCTGGGTTGAGCGAAGTGATCTCATTGGTCCAGCAGCTCCTCACCCAGGTGGTGTACCCTATTTCGGGTGATTTTCCCACCAGGAAGGGACAATTTCCTTCCTGGATTAAACCAAGGGAGCAGAAGCTGATACAGGCAAATGAGGTGACGGCGGATGTTGTAGTGGCTACAGATGGGACAGGGGATTTCACAAGTGTAACTGATGCAGTTCTAGCAGCTCCTGAATACAGCATGAAACGCTTTGTTATTTACATAAAGAGGGGTGTGTACACAGAGAACGTCGATATCAAGAAGAAGAAATGGAACATCATGATGATTGGAGATGGCATGGATGCCACTGTTATCTCCGGTGACCGGAATTACATCGACGGTTGGACCACATTCCGATCGGCTACCTTCGCTGTTAGTGGAAGAGGGTTCATAGCACGAGACATCACCTTCCAGAACACTGCAGGGCCCGAGAAGCACCAAGCAGTGGCACTGAGATCAGACTCTGACCTCTCTGTCTTCTACCGCTGCGGCATCTATGGGTACCAAGACAGCCTCTACACCCACACCATGCGACAATTCTACAGAGAATGCAAAATAAGTGGCACTGTGGATTTCATATTCGGAGACGCCACCGTAGTGTTTCAAAAGTGCCAAATTCTGGCAAGAAAAGGGCTGCCAGGTCAGAAGAACACCATCACAGCACAAGGACGAAAAGACCCAAATGAGCCATCGGGTTTCTCCATCCAATTCTGTAACATCTCTGCGGATTCTGACCTGCTTCCCTCAGTGAACTCCATAGAAACATACCTGGGTAGGCCCTGGAAGGCATTTTCTCGAACAGTTGTCATGCAATCCTACTTGAGCAATGTGGTGAGGCCAGAAGGGTGGCTAGTGTGGAATGCGGATTTTGCTTTGAAAACATTGTACTATGGAGAGTACATGAACAAGGGACCAGGGGCTGGAGTGGAGAACCGGGTGAAGTGGGAAGGGTTCCATGTGTTCAACGATTCGAGGGAAGCTAGTCCCTTCACAGTGGCTCAACTTATTGAGGGGAATTTATGGCTGCCTTCTACCGGCGTAACGTACACTTCTGGATTGGGAGACTGA 1674 0.4833 MVEAVVVTVGGCQGQDALQISIMDLQQQQQETHLFQVPMAVSSTKELSRTPSITFIFLLILILGQCTPFGDSARSDFRVSKCLTVSAPEFLQVMEQTIDTLHQVASKLGQFSNVFSDFRLSNAISDCLDLFDLSFDDLNWAVSATENPGGKHNSTGNLSSDLRTWLSAALSHPQTCMDGFEGTNSIVKGIVSSGLSEVISLVQQLLTQVVYPISGDFPTRKGQFPSWIKPREQKLIQANEVTADVVVATDGTGDFTSVTDAVLAAPEYSMKRFVIYIKRGVYTENVDIKKKKWNIMMIGDGMDATVISGDRNYIDGWTTFRSATFAVSGRGFIARDITFQNTAGPEKHQAVALRSDSDLSVFYRCGIYGYQDSLYTHTMRQFYRECKISGTVDFIFGDATVVFQKCQILARKGLPGQKNTITAQGRKDPNEPSGFSIQFCNISADSDLLPSVNSIETYLGRPWKAFSRTVVMQSYLSNVVRPEGWLVWNADFALKTLYYGEYMNKGPGAGVENRVKWEGFHVFNDSREASPFTVAQLIEGNLWLPSTGVTYTSGLGD 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2024 557 Gene3D Invertase/pectin methylesterase inhibitor family protein 83 211 IPR035513 -
Glsi02g2024 557 Pfam Pectinesterase 244 541 IPR000070 GO:0030599|GO:0042545
Glsi02g2024 557 ProSitePatterns Pectinesterase signature 2. 388 397 IPR033131 -
Glsi02g2024 557 CDD PMEI-like_4 52 210 - -
Glsi02g2024 557 PANTHER PECTINESTERASE 93 545 - -
Glsi02g2024 557 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 93 202 IPR035513 -
Glsi02g2024 557 Pfam Plant invertase/pectin methylesterase inhibitor 113 192 IPR006501 GO:0004857
Glsi02g2024 557 Gene3D - 238 555 IPR012334 -
Glsi02g2024 557 SUPERFAMILY Pectin lyase-like 242 554 IPR011050 -
Glsi02g2024 557 SMART PMEI_2 73 212 IPR006501 GO:0004857
Glsi02g2024 557 FunFam Pectinesterase 238 555 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2024 Glsi-ChrGlsi02 70096577 70101273 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2024 52 555 Carbohydrate Esterase AT3G43270 60.811 0.0 669