Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2023 ATGGCTTCCTCATCTCTAAAACTCTTCCTTCTTCTCTTGCCAATCTTTTTTTCCCAAACTTCTTCTGCGAACTCATCCAATGCTTCCCAAACATTCCAAGCAAAAAATCTCTCTTCCTTGAGATCTTTCTGCGCAACCACCCCATACCCTGAAGCTTGCTTCGATTCCTTGAAGCTCTCCATTTCCATAAACATAAGCCCAAACATCATCACGTACCTCCTTCAGTCCCTCCAAGTAGCCATCTCCCAAGCCACAAAGCTCTCTGATCTGTTCCAAAACGCAGGCCATCCCAACATCATTGAGCAACAGAGAGGAGCAGTTCAAGATTGCAGGGAGCTTCACCAATCCACCTTGGCTTCTCTAAAAAAATCACTATCTGGGGTTCGTGATTCTTCAAACTCTAGAAAGCTAGCTGATGCTAGAACCTACCTAAGTGCAGCAGTTACCAACAAGAACACATGCTTAGAAGGATTAGACTCTGCTTCGGGTTCCCTGAAGCCAGTTCTGATTGACTCTGTGATCAGCACATACAAGCATGTCAGCAATTCTCTTTCTATGCTCTCTAAAGGAAGCAAGACCCGCTACCGCCGCCGTAGGCTGATGGGTGCTCCGGCGTGGGTTTCCGGACGTCGACTATTGCTGAGCTCTGATGGAGAAGAGTATGATCCTGATGAGCTGCTAGTGGTTGCTGCAGATGGAAGTGGGAACTTTAGCACCATTACTGAAGCTGTGAACTTTGCTCCCGACAATAGTGTTGACAGGACAGTAATTTATGTTAAGGAAGGGGTTTACGAGGAAAATGTCGAAATCCCAAGTTACAAGACCAACATTGTTCTGCTTGGAGATGGAAGTGATGTCACTGTCATTACTGGTAGCAGAAGTGTGGTTGATGGCTGGACCACTTTCAGATCTGCAACTTTAGCTGTTTCCGGTGAGGGATTTCTAGCACGTGACATAGCCATAGAAAACAAAGCAGGGCCAGAGAAGCACCAAGCAGTGGCCTTGAGAGTAAACGCAGACTTAACTGCCTTATACAGATGCGCCATTAAGGGCTACCAAGACACTCTCTACGTCCACTCCTTCCGACAATTCTACAGAGAATGTGACATTTACGGAACCATAGATTTCATCTTCGGAAACGCAGCTGTTGTTTTTCAAGCATGCGACATCGTATCAAGAAAGCCATTACCCCATCAATTCACTGTAATCACAGCACAAGCCAGAGAAACCCCAGATGAGGACACTGGAATCTCAATCCAAAACTGCTCGGTTCTAGCCACGAATGATCTCTATTCCAATTCTAGCAGCTTCAGGAGCTACCTAGGAAGGCCATGGAGGCTCTATTCTCGTACTGTGTACCTTGAGTCTTACATTGATGACTTTGTTGATCCGATGGGGTGGACCAAGTGGTCTGAGGAAGATCAAGGATTGGATACTTTGTACTATGGAGAGTACGAGAATTATGGGCCTGGTTCTCGGACGAATGATCGAGTGACTTGGGTTGGTTACCATGTGATGGAGTACGAGGATGCTTATAATTTCACAGTTTCTGAGCTTATTAGTGGGGATACTTGGCTGGAGTCCACTTCCTTCCCTCATGATGATGGGATTTGA 1614 0.4616 MASSSLKLFLLLLPIFFSQTSSANSSNASQTFQAKNLSSLRSFCATTPYPEACFDSLKLSISINISPNIITYLLQSLQVAISQATKLSDLFQNAGHPNIIEQQRGAVQDCRELHQSTLASLKKSLSGVRDSSNSRKLADARTYLSAAVTNKNTCLEGLDSASGSLKPVLIDSVISTYKHVSNSLSMLSKGSKTRYRRRRLMGAPAWVSGRRLLLSSDGEEYDPDELLVVAADGSGNFSTITEAVNFAPDNSVDRTVIYVKEGVYEENVEIPSYKTNIVLLGDGSDVTVITGSRSVVDGWTTFRSATLAVSGEGFLARDIAIENKAGPEKHQAVALRVNADLTALYRCAIKGYQDTLYVHSFRQFYRECDIYGTIDFIFGNAAVVFQACDIVSRKPLPHQFTVITAQARETPDEDTGISIQNCSVLATNDLYSNSSSFRSYLGRPWRLYSRTVYLESYIDDFVDPMGWTKWSEEDQGLDTLYYGEYENYGPGSRTNDRVTWVGYHVMEYEDAYNFTVSELISGDTWLESTSFPHDDGI 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2023 537 SMART PMEI_2 35 186 IPR006501 GO:0004857
Glsi02g2023 537 FunFam Pectinesterase 221 537 - -
Glsi02g2023 537 Pfam Plant invertase/pectin methylesterase inhibitor 39 186 IPR006501 GO:0004857
Glsi02g2023 537 Gene3D Invertase/pectin methylesterase inhibitor family protein 35 189 IPR035513 -
Glsi02g2023 537 NCBIfam pectinesterase inhibitor domain 3 189 IPR006501 GO:0004857
Glsi02g2023 537 CDD PMEI-like_3 42 192 - -
Glsi02g2023 537 SUPERFAMILY Pectin lyase-like 225 533 IPR011050 -
Glsi02g2023 537 FunFam Pectinesterase 36 189 - -
Glsi02g2023 537 Gene3D - 223 537 IPR012334 -
Glsi02g2023 537 PANTHER PECTINESTERASE 16 527 - -
Glsi02g2023 537 ProSitePatterns Pectinesterase signature 2. 370 379 IPR033131 -
Glsi02g2023 537 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 40 189 IPR035513 -
Glsi02g2023 537 Pfam Pectinesterase 227 523 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2023 Glsi-ChrGlsi02 70075703 70078296 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2023 38 537 Carbohydrate Esterase AT2G26440 67.704 0.0 708