Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2021 ATGAGCTATAGCGATGGAATTAATTTTGTTGCTGTTGTTGTTGTTGCATTAAGTTACGCAGAGATCCATGATGGCTTCAGGGAAAGCTTTGCTGGCTCTTCCATTATTAATGGCTTGCACTTCTGGACCAATGTGCTATGCTACGAAACACGGGAAGATGGAGGAGATGATCAAGATTTGATTACCACAACCTGCAAGCACACCCTCCATTTTCAAGTATGCGTTTCATCCTTAAGATCTGATCCCCATAGCCACACAGTTTCTGATCTCAAAGGCCTTGCTGTGATTGCACTGAACCTGAGCTTAGCTCATGCAGCTAAAGTCCTGTCTTCTGTTCACGAGCTGATGAACAATGACACCAACAATGGCAAATACATGGCCAGTTGCTTAAGTGATTGCCTGGAGGAATACTCGGAAGCCTTTGAGAATTTGAAGGAGTCAGAAGAAGCACTTGGAGATGGAGACTATGGCAAAGTTGAGACTTTGGTCAGTGCTGCCATGACTGATGCTGAGACGTGCGAGGATGGCTTCAAGCATGACAATGATAATGATAAAAGCTCTTATCCTCTCACTGAGAGCAACTGCTACTTCTCTGAGTTGTGCAGTAATGTTCTTGCCATTACAAAACTTTTAATTTGA 639 0.4351 MSYSDGINFVAVVVVALSYAEIHDGFRESFAGSSIINGLHFWTNVLCYETREDGGDDQDLITTTCKHTLHFQVCVSSLRSDPHSHTVSDLKGLAVIALNLSLAHAAKVLSSVHELMNNDTNNGKYMASCLSDCLEEYSEAFENLKESEEALGDGDYGKVETLVSAAMTDAETCEDGFKHDNDNDKSSYPLTESNCYFSELCSNVLAITKLLI 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2021 212 SMART PMEI_2 56 207 IPR006501 GO:0004857
Glsi02g2021 212 CDD PMEI-like_1 60 211 - -
Glsi02g2021 212 PANTHER PECTINESTERASE INHIBITOR-LIKE 39 211 - -
Glsi02g2021 212 Pfam Plant invertase/pectin methylesterase inhibitor 59 207 IPR006501 GO:0004857
Glsi02g2021 212 FunFam Invertase/pectin methylesterase inhibitor family protein 56 212 - -
Glsi02g2021 212 Coils Coil 130 150 - -
Glsi02g2021 212 Gene3D Invertase/pectin methylesterase inhibitor family protein 55 212 IPR035513 -
Glsi02g2021 212 NCBIfam pectinesterase inhibitor domain 57 211 IPR006501 GO:0004857
Glsi02g2021 212 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 58 211 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2021 Glsi-ChrGlsi02 70042785 70049864 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2021 60 209 Carbohydrate Esterase AT3G14310 25.949 1.43e-10 58.2