Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2014 ATGATGTTCCATGCTCAGGGTCTTTCAAAAAATTCTAGTCTCCTTGCCGTCCTAAGTGGAAAATCACGTGACTCTAAACAAAAGCAGAAGCAAGATGTTTCTAAAAATCAATCTCTATACCCCCTTCCAGAGCTCGCTTCATCTGGGCGTCTTGAGGTGAAGGTTTTGACCAAACCGACTGCTGATGAGCTTCGTCGAGTTATTGAAACACTGGAGCCAAATTTTGTTTACCTGCAAGGCGAGCAGCTAGAAGATAATGGACAAATTGGATCTCTAGTATGGGAAGATGTTGACCTGTCTAACTCAGAAGCCTTATGTGGATTATTTTCTTCCAAATTACCCAATACTGTTTATTTGGAAACTCCTAAAGGAGAAAAATTGGCAGAGGCACTACATTTTAAGGGGGTTCCTTACACCATATATTGGAAAAATGAATTTTCAAAGTATGCAGCATCACATTTTCGTCAAGCTTTTTTCTCAGTGGCACAAAGTACATCCAGCCATACATGGGATGCTTTCCAGCTTGCTCTTGCATCTTTTAGACTATACTGTGTAGAAAACAATGTCTTACCTTCTAACAGCCTGAAGGGTGGGAGCAAGCTTGGGCCACAAATGCTTGGGGACCCTCCCAACATTGATGTTGGTCCGTGTGAAGCAGACATCAATGGGGAGGAAAGCTTACCTGAGACTATTTCTTCAGTAAAAATTTATGATAGTGATGTGAACATGAGATTTCTTCTTTGTGGGGTTCCCTGCATGCTGAAAAAGGACACTTGCTTATTGGGATCATTGGAGGATGGGCTTAATGCTCTCCTGTGTACAGAAATACGGGGGTGTAAACTCCACAACCGGACAAGTGCTCCACCACCACCTCTTCAGGCAGGGACATTCTCTCGTGGTGTGGTAACTATGCGTTGTGACATATCCACTTGTAGTGCTGCTCATATATCACTTTTGGTGTCTGGTAGCCCAGATACTTGTTTTAATGATCAGCTTTTGGAGAATCATATTAAAAAGGAGCTGATCGAGAAGAGTCAGCTAGTTCAGGCATCTACTTATTGTGAACCAAGCAACTTACCTTCTTCCGAGCCTCGAAGTTCTGCCTCGGTAGCCTGTGGAGCTAGTGTTTTTGAAGTTTGTATGCAAGTTCCTACATGGGCCTCACAGGTTCTTAGACAGCTTGCACCAGATGTGTCACACCGCAGCCTAGTTATGCTGGGAGTAGCCGGTATTCAAGGATTATCTGTTGCATCTTTTAATAAAGATGATGCCAAACGTCTCCTTTTCTTCTGTTCTAGTGAGGCAAAAGAAGATTGCCCCAATGAGCATGTTTCCTTTAGGCATCCTAGTTGGTTGATGCCTCCACCACCTACACGAAAAAGATCAGAGCCATGCTCAGGAACAAAGTCCATCAATGCTAGTAGCCTTGAAGTTGGGAATAGTGGTAATGGTAGACAAAAGTTGAATATTGCTGCTCTGAGGCCAATACCTCACTCTCATCGGCAGAAGATTCTACCTTTTTCTGGACTGTCTGAGGGGGAAAGATATGATGGAGACCGTGGAAAATTTAATTTGCCTGCTGCTCCTATGAAGCATAATGTTGTAGGCCCTAAACCAGTTACGCATAAGAAATCTTTGACAAATTCCTTTCAGGCTCAACAGATTATTTCTTTAAATCCATTACCTATGAAGAAGCATGGTTGCGACAGAGCTCCAATACGAGTTTGTTCAGAGGAGGAATTCCTGAGGGATGTTATGCAGTTTCTGATCCTTCGTGGGCATACACGTCTTATTCCACAAGGTGGTCTTGCTGAATTCCCTGATGCCATTTTGAATGCAAAACGCCTTGACCTTTTTAACTTGTATAGAGAGGTGGTTTCAAGAGGAGGCTTTCATGTTGGGAATGGCATCAATTGGAAAGGACAAGTTTTCTCGAAAATGCGCAATCACACTTTGACAAATAGAATGACAGGTGTTGGCAATACATTAAAAAGACATTATGAAACTTACCTTCTAGAATATGAATTAGCTCATGAAGACGTAGATGGAGAGTGCTGCTTGTTGTGCCACAGTAGTGCGGCAGGTGATTGGGTGAACTGCGGGATATGCGGTGAGTGGGCTCACTTTGGCTGTGATAGGCGGCAGGGACTTGGCGCGTTCAAGGACTATGCTAAAACTGATGGGCTGGAGTACATTTGTCCTCACTGCAGCATCTCAAATTTCAGGAAGAAATCCCAGAAAACTGCAAATGGGTTTTGA 2259 0.4338 MMFHAQGLSKNSSLLAVLSGKSRDSKQKQKQDVSKNQSLYPLPELASSGRLEVKVLTKPTADELRRVIETLEPNFVYLQGEQLEDNGQIGSLVWEDVDLSNSEALCGLFSSKLPNTVYLETPKGEKLAEALHFKGVPYTIYWKNEFSKYAASHFRQAFFSVAQSTSSHTWDAFQLALASFRLYCVENNVLPSNSLKGGSKLGPQMLGDPPNIDVGPCEADINGEESLPETISSVKIYDSDVNMRFLLCGVPCMLKKDTCLLGSLEDGLNALLCTEIRGCKLHNRTSAPPPPLQAGTFSRGVVTMRCDISTCSAAHISLLVSGSPDTCFNDQLLENHIKKELIEKSQLVQASTYCEPSNLPSSEPRSSASVACGASVFEVCMQVPTWASQVLRQLAPDVSHRSLVMLGVAGIQGLSVASFNKDDAKRLLFFCSSEAKEDCPNEHVSFRHPSWLMPPPPTRKRSEPCSGTKSINASSLEVGNSGNGRQKLNIAALRPIPHSHRQKILPFSGLSEGERYDGDRGKFNLPAAPMKHNVVGPKPVTHKKSLTNSFQAQQIISLNPLPMKKHGCDRAPIRVCSEEEFLRDVMQFLILRGHTRLIPQGGLAEFPDAILNAKRLDLFNLYREVVSRGGFHVGNGINWKGQVFSKMRNHTLTNRMTGVGNTLKRHYETYLLEYELAHEDVDGECCLLCHSSAAGDWVNCGICGEWAHFGCDRRQGLGAFKDYAKTDGLEYICPHCSISNFRKKSQKTANGF 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2014 752 CDD PHD_ARID4_like 685 736 - -
Glsi02g2014 752 SUPERFAMILY ARID-like 576 690 IPR036431 GO:0003677
Glsi02g2014 752 CDD ARID 577 675 - -
Glsi02g2014 752 SMART ARID_2 572 675 - -
Glsi02g2014 752 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 679 741 IPR013083 -
Glsi02g2014 752 Gene3D - 573 678 IPR036431 GO:0003677
Glsi02g2014 752 SUPERFAMILY FYVE/PHD zinc finger 671 739 IPR011011 -
Glsi02g2014 752 ProSiteProfiles ARID domain profile. 575 679 IPR001606 GO:0003677
Glsi02g2014 752 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 4 4 751 IPR042293 -
Glsi02g2014 752 Pfam ARID/BRIGHT DNA binding domain 578 675 IPR001606 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2014 Glsi-ChrGlsi02 69932550 69939639 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2014 2 751 ARID Transcription Factor Family AT3G43240 65.870 0.0 992
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Glsi02g2014 ARID 9.8e-14 CL0123