Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2009 ATGATAGGAGCAGAGGAGAGAGAGAGAGAGAGAGAGAGAGAAATGGGAAGAGAGAGAGAGGTAGCATACACAGTGGAGCAGCTTGTCGCCGTTAATCGCTATAATCCTGACATCCTTCCCGATCTCGAAAACTATGTCAACGAGCAGGTTTCGTCCCAAACATACAGCTTGGATGCAAATCTATGCCTTCTTCGCCTCTACCAGTTTGAACCAGAGAGAATGAGTTCCCAGATTGTAGCCCGCATATTGGTTAAGGCCCTCATGGCGATGCCTGCTCCAGACTTCAGCCTGTGTCTCTTTCTGATTCCAGAACGTGTGCAAATGGAGGAGCAATTCAAGACACTGATTGTTCTATCGCACTATTTGGAGACAGGAAGATTTCAGCAGTTCTGGGATGAAGCATCAAAGAGTCGACATATAGTGGAAGCTGTGCCAGGATTTGAGCAAGCAATCCAAGGCTATGCAATTCATGTCCTTTCCTTAACTTACCAAAAAGTTCCAAGATCTGTACTTGCTGAGGCTATCAACATAGAAGGTTTGTCCTTGGACAAATTCCTTGAACACCAGGTAACCAACTGTGGTTGGGTTATTGAGAAAGGCCAGAGCAAGGGTCAACTCATCGTCCTACCTAGAAATGAATTCAATGACCCTGCTTTGAAGAAAAACACTGCAGATAGTGTGCCATTGGAGCACATTACTCGCATTTTCCCTATACTTGGCTGA 723 0.455 MIGAEEREREREREMGREREVAYTVEQLVAVNRYNPDILPDLENYVNEQVSSQTYSLDANLCLLRLYQFEPERMSSQIVARILVKALMAMPAPDFSLCLFLIPERVQMEEQFKTLIVLSHYLETGRFQQFWDEASKSRHIVEAVPGFEQAIQGYAIHVLSLTYQKVPRSVLAEAINIEGLSLDKFLEHQVTNCGWVIEKGQSKGQLIVLPRNEFNDPALKKNTADSVPLEHITRIFPILG 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2009 240 SUPERFAMILY ARM repeat 21 143 IPR016024 -
Glsi02g2009 240 Gene3D - 136 238 IPR036388 -
Glsi02g2009 240 Gene3D ARM repeat; domain 1 18 133 IPR016020 GO:0003743|GO:0005852|GO:0006446|GO:0043022
Glsi02g2009 240 ProSiteProfiles PCI domain profile. 55 214 IPR000717 -
Glsi02g2009 240 Hamap Eukaryotic translation initiation factor 3 subunit K [EIF3K]. 15 240 IPR009374 GO:0003743|GO:0005737|GO:0005852
Glsi02g2009 240 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 11 14 237 IPR009374 GO:0003743|GO:0005737|GO:0005852
Glsi02g2009 240 Pfam CSN8/PSMD8/EIF3K family 75 200 IPR033464 -
Glsi02g2009 240 FunFam Eukaryotic translation initiation factor 3 subunit K 136 239 - -
Glsi02g2009 240 SUPERFAMILY "Winged helix" DNA-binding domain 145 237 IPR036390 -
Glsi02g2009 240 FunFam Eukaryotic translation initiation factor 3 subunit K 17 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2009 Glsi-ChrGlsi02 69805387 69812222 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2009 18 240 Eukaryotic Initiation Factors Gene Family AT4G33250 78.475 3.65e-131 367
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g2009 02 69805387 69812222 Glsi02g2009 02 69805387 69812222 ECH