Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g1999 ATGCAAATGTCTCTCCCTCTCCCACTCCCACTCTATGCTCTTTTCTTCTTCCTGCTCCTCTCTCCCCCCTCCTCCTCCTCCGCCACTGCATCTCCACCCAACCACCAAGATCTGGTCCGTTCCTCGTGCCTCCACGCCAGGTACCCCCACCTCTGCCTCCGAACCCTCTCATCCTACGCCGGACCCGCCATCAATACCCCCAACGACCTCGCCCAAGCTGCCCTCGAGGTCAGCCTCGACCACGCTCGCAGACTCTCACATTTCCTCAACACCCATGCTTCTTCACTGACCGCGAGTACCGGCGGCGCCGTCGGCAACAGTCGACGCCGGCAGGAGGCGGCGCTGAGTGATTGTGTGGAGCAGATATCGGACTCGGTGGAGGATCTGAGCAAGAGCTTGACGGAATTGCAGCATCTGCGAACGGACACGTTTCAGTGGCAGATGAGCAACGCCCAGACGTGGGTCAGTGCCGCCATGACCGACGACGACACCTGCTTGGATGGCTTAACGTTCAACGTTAAATATAACGGCGTCAAGCTCAAGCGTAAGATTAGCAGGGTAGCGAGGGTCACCAGCAATGCGCTCTACATGATCAATCGCCTCTGTGACAGCCGCAGCCATTCCCGACCGTCTGATTAA 639 0.5869 MQMSLPLPLPLYALFFFLLLSPPSSSSATASPPNHQDLVRSSCLHARYPHLCLRTLSSYAGPAINTPNDLAQAALEVSLDHARRLSHFLNTHASSLTASTGGAVGNSRRRQEAALSDCVEQISDSVEDLSKSLTELQHLRTDTFQWQMSNAQTWVSAAMTDDDTCLDGLTFNVKYNGVKLKRKISRVARVTSNALYMINRLCDSRSHSRPSD 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g1999 212 PANTHER PECTINESTERASE INHIBITOR-LIKE 14 196 - -
Glsi02g1999 212 FunFam Pectinesterase inhibitor 3 34 202 - -
Glsi02g1999 212 NCBIfam pectinesterase inhibitor domain 12 201 IPR006501 GO:0004857
Glsi02g1999 212 SMART PMEI_2 34 197 IPR006501 GO:0004857
Glsi02g1999 212 CDD PMEI-like_3 41 201 - -
Glsi02g1999 212 Pfam Plant invertase/pectin methylesterase inhibitor 37 196 IPR006501 GO:0004857
Glsi02g1999 212 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 36 201 IPR035513 -
Glsi02g1999 212 Gene3D Invertase/pectin methylesterase inhibitor family protein 34 202 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g1999 Glsi-ChrGlsi02 69614806 69615444 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g1999 29 204 Carbohydrate Esterase AT3G14310 28.804 2.10e-14 69.3