Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g1989 ATGGGTACCGAGAGTAAACATGACGAAGTAAACGCCACAGAGAATCATGTAGAAACCAGCACCAACAAGGAAAGGAGAGATAAGAGAGGGTGCGGAGTTCCTGATGAAAAGCAAACAGTATTTGCTTACAGCAAATTTCTTGTAGATGCTTACAAATTAGGATTTCATGAATGTACGATAGCCAGAATGGGTTTCGACACAGTTATGTGTGTTTTCTTTTGTGATTATGCACTGGCAGTATGTTTTGGCACAGAGATGATACTGGAAAAAGGATATAACAGGGGTACAGTGACTAATGTGATGGTTGCTATACTAACCGCTTCCATGTCTCTTGGGCAGGCAAACCCTTGCATGAGTGCTTTTGCTGCGGGTGAGCATGGAAATCAACTATCTGGTGGACAGAAGCAGTGCATTGCCATCGCAAGAGCAATTATGAAAAATCCAAGAATTCTGCTTCTAGATGAAGCTACAACACATTGCTTGAGCATAGTGAAGAATGTTGATATGATTGCCATAATTCATAGAGGGAAGATGGTTGAGAAAGTGGTTCCACAACACCGCCTTTCTTACCTCAACAAGCCTGAGGTTCCAGTGCTTCTGCTTGGATGTGTAGCTAAAACAATAAATGGGGTCACTTCCAATTTATGGTTTAATTATTACCTTAGTCGCGAGTTGGTAGCTAGTTTCATTAATCTAGCCTTGATTCCCTTAATTGGAGTAAATGGATATATTCAAATGAAATTCATGAAAGGATTCAGTGCAGATGCAAAAATATTAATGTACGAGGAAGCAAGCCAAGTTGCTAGTGATGCAGTTGGAAGTGTAAGAATAGTGGCTTCTTTCTGTGCTGAAGAGAAGGTAACAGAGCTATACAGGAAGAAATGTGAAGACCCTATGAACTCTGGATACAGCAAGGAATGA 921 0.4072 MGTESKHDEVNATENHVETSTNKERRDKRGCGVPDEKQTVFAYSKFLVDAYKLGFHECTIARMGFDTVMCVFFCDYALAVCFGTEMILEKGYNRGTVTNVMVAILTASMSLGQANPCMSAFAAGEHGNQLSGGQKQCIAIARAIMKNPRILLLDEATTHCLSIVKNVDMIAIIHRGKMVEKVVPQHRLSYLNKPEVPVLLLGCVAKTINGVTSNLWFNYYLSRELVASFINLALIPLIGVNGYIQMKFMKGFSADAKILMYEEASQVASDAVGSVRIVASFCAEEKVTELYRKKCEDPMNSGYSKE 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g1989 306 PANTHER ABC TRANSPORTER B FAMILY 36 124 IPR039421 -
Glsi02g1989 306 ProSitePatterns ABC transporters family signature. 130 144 IPR017871 GO:0005524|GO:0016887
Glsi02g1989 306 Gene3D ABC transporter type 1, transmembrane domain 36 123 IPR036640 GO:0005524|GO:0016020
Glsi02g1989 306 Gene3D ABC transporter type 1, transmembrane domain 201 302 IPR036640 GO:0005524|GO:0016020
Glsi02g1989 306 SUPERFAMILY ABC transporter transmembrane region 228 303 IPR036640 GO:0005524|GO:0016020
Glsi02g1989 306 MobiDBLite consensus disorder prediction 1 32 - -
Glsi02g1989 306 Gene3D - 124 157 IPR027417 -
Glsi02g1989 306 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 114 191 IPR027417 -
Glsi02g1989 306 Pfam ABC transporter transmembrane region 228 305 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Glsi02g1989 306 Pfam ABC transporter 122 157 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g1989 Glsi-ChrGlsi02 69499781 69502614 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g1989 82 195 Calmodulin-binding Proteins AT2G36910 32.639 1.16e-10 60.5