Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g1981 ATGTCGAGCTCCACGGACTATTCGGAGTTTTCCGGCCTGAAGACGGCCAAGTTGCCGGAGAAGTCTTCGTTCTCTCAGACTTGTAGTCTATTGAGTCAGTACCTGAAGGAGAAGGGCAGCTTCGGAGATCTTACCCTCGGGATGACATGCAACCCCGAAGGAACTGGGTCACTTGAGGCATCTTCTCAGTCTGCAACAACCATGAACTTATTTCCAACCAAGGAAAACACCATGGCACCCCAGAATTCCAGTGTGGTTAAATCTGTGACCAAGGAGCCTAAAGCTGCACAGTTGACAATCTTTTATGCTGGACAAGTTATTGTTTTCGATGATTTTCCGGCCGATAAAGCCAAGGAGATCATGTCCTTTGCCAGCAAAGGAAACTCCCAAACCCAGAACGGCTCTACTTTTACTTTTGCTCAAAGCCAGCCTTCATTTCCTGCTACTTTGGTCAGAACTTCTGCTGATCCCAGTGTTCCAGTTCCTCCTAATGTTGGCAAACCTCAAGCACCATCCAGACCTGTTATTGGTGATTTACCAATCATGAGGAACGCCTCGCTTCACCGGTTCTTGGAAAAGAGAAAGGATAGAATTGCTGCCAAAGCACCATATCAAACAAGCAAACCCATGGTCGCTCCAAGTAAGCCAGCTGAATCTGCCGCACCATGGCTGGGGTTGGCTGCTCAGTCTCCACAAAACTAA 702 0.4815 MSSSTDYSEFSGLKTAKLPEKSSFSQTCSLLSQYLKEKGSFGDLTLGMTCNPEGTGSLEASSQSATTMNLFPTKENTMAPQNSSVVKSVTKEPKAAQLTIFYAGQVIVFDDFPADKAKEIMSFASKGNSQTQNGSTFTFAQSQPSFPATLVRTSADPSVPVPPNVGKPQAPSRPVIGDLPIMRNASLHRFLEKRKDRIAAKAPYQTSKPMVAPSKPAESAAPWLGLAAQSPQN 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g1981 233 Pfam Jas motif 180 205 IPR018467 -
Glsi02g1981 233 ProSiteProfiles Tify domain profile. 91 126 IPR010399 -
Glsi02g1981 233 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 17 215 IPR040390 -
Glsi02g1981 233 SMART tify_2 91 126 IPR010399 -
Glsi02g1981 233 MobiDBLite consensus disorder prediction 156 177 - -
Glsi02g1981 233 MobiDBLite consensus disorder prediction 201 233 - -
Glsi02g1981 233 Pfam tify domain 92 125 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g1981 Glsi-ChrGlsi02 69443291 69445011 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g1981 1 229 Tify Gene Family AT1G19180 43.130 7.08e-56 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Glsi02g1981 tify 7.4e-19 No_clan