Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g1978 ATGGCTTTATCCATTTCCTCCACCGCATTTTCAAATCTTCCAACCAGAGAAATACGTCGAAAGATTTTCCCGGAAAGAAAAGCTATAGCAAGCTTGCCAAGAAAAACCCTTACACATGCAACGAAAGGAGTGTCGAGCGTTTGTGAGCCACTTCCTCCGGATAGGCCATTGTGGTTCCCTGGTAGCTCACCCCCTGAGTGGCTCGATGGCAGTCTTCCTGGGGATTTTGGCTTCGACCCCCTTGGATTAGGGTCCGATCCAGAGTTACTAAAATGGTTCGCTCAAGCGGAGCTTATGCACGCAAGATGGGCAATGCTGGCAGTGTCAGGAATTCTAATACCAGAAATACTCGAAAAACTGGGTTACATCGACAACTTCTCTTGGTACGATGCTGGCTCTCGAGAATACTTTACGGATTCTACGACGTTGTTCATTGTGCAAATGGCCTTGATGGGTTGGGTAGAGGGTCGGAGATGGGCTGATATGGTTAACCCAGGGAGTGTTGACATCGAGCCTAAGTTCCCACACAAGACCAACCCAAAACCAGACGTGGGCTACCCAGGTGGGCTATGGTTCGATCCCATAATGTGGGGGCGAGGGTCCCCGGAGCCAGTGATGGTGCTTAGGACCAAGGAGATCAAGAACGGTCGGCTTGCGATGCTGGCTTTTGTTGGGTTCTGGTTCCAAGCCATTTATACAGGAGAAGGCCCTCTTGAAAACTTAATGGCACATATTGCAGATCCTGGTCACTGCAACATTTTCTCGGCTTTCACATCAAATTAG 783 0.4943 MALSISSTAFSNLPTREIRRKIFPERKAIASLPRKTLTHATKGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLAVSGILIPEILEKLGYIDNFSWYDAGSREYFTDSTTLFIVQMALMGWVEGRRWADMVNPGSVDIEPKFPHKTNPKPDVGYPGGLWFDPIMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGFWFQAIYTGEGPLENLMAHIADPGHCNIFSAFTSN 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g1978 260 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 21 258 IPR001344 GO:0009765|GO:0016020
Glsi02g1978 260 Gene3D Chlorophyll a/b binding protein domain 65 250 - -
Glsi02g1978 260 FunFam Chlorophyll a-b binding protein, chloroplastic 65 250 - -
Glsi02g1978 260 SUPERFAMILY Chlorophyll a-b binding protein 54 258 - -
Glsi02g1978 260 Pfam Chlorophyll A-B binding protein 64 230 IPR022796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g1978 Glsi-ChrGlsi02 69419697 69421941 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g1978 53 258 Chloroplast and Mitochondria Gene Families AT3G61470 67.961 5.27e-106 306