Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g1977 ATGGCCGCTGTTCGACCACACTTTTTCTTACCTCTCTTCTTGCTCACACTTTCTTTCTTTTCTTCTTCTTTGTCTATAACAGAAGCAGAGGCCCTCCTCAAGCTCAAAAAATCCTTCACCAATTCCGACCCGTCTCTTGCTTCTTGGCTTCCCAATACATATCCTTGTGCTGCAAGGTGGAAGGGCGTGATTTGCTTCGACAACGTCATCTCCAGTCTGCACCTCACGGATTTGGGTCTTTCGGGGATGATCGACATTGACGCTATCAAGGAGATTCGGGGGCTTCGAACCCTCAGCTTCGCGAAAAACAATTTCTCGGGTCCAATCCCAGAGTTCAATAGAGTCGGTGCTCTCAAGGCTTTGTACTTGAGTGAAAATAAATTTTCTGGGTCAATTCCTCAAGATTTCTTCTCCCACTTAGACTCGCTGAAGAAAATATGGCTTGATGGGAACAAATTCTCCGGAAACATACCCGAGTCCATAGTCCAGCCAGAGTTTCTGAAACAAGTCCACTTAGAAGACAACGAATTTTCAGGACCTGTCCCTGCTTTTATGCAAGATCTTATAACGCTGAACGTGTCATATAACAAATTGGAAGGTCGAATTCCAGAGAGCGTAGCAAGGTATGGGCCCAAGGCATTCGAAGGAAACCAAGGACTCTGCGGAAAACCCTTGGATAAGGCATGTGAGCAGCACCCCCCAGCCCTTGAAAATAAACAGGAAAATGGCTCGGTCTTGAAGATCATTTTGATTGTCGCTGTTGTGATTATCGGGGTCTTACTTTGCTGCGTAGTGGCCAGGTCGTCGTCAAAGCGTCGAGATGACGATTTCAGTGTGCTCAGTAGAGAGAGCATCGATCAGGTGGTTCAAGTGCACGTAGCCAGCTCAACCCGAAGCAGGTCATCGGAATCGAGCAGAAAGCGTATAAGTTTCAAGAGGGGTTCGACCAAGAATGGCTCCAGTGACCTTGTGGTGGTGAATGACGAAAAGGGTATCTTTGGGTTGCCAGATTTGATGAAGGCGGCGGCAGAAGTTTTAGGAAATGGTCCATTGGGTTCGGCATATAAGGCAGCCATGGCGAGTGGGTTATCGGTGGTGGTGAAGCGGATGAGGGAGATTAATCAGATAAGTAGAGATGCTTTTGATGCTGAGATGAGACGCATTGGGAGGATCAGACACCCCAATATATTGACGCCTTTGGCTTACCATTTCCGCAAAGAGGAGAAGCTATTTGTCTCAGAATACATCCCCAAAGGCAGCTTGTTATATCTCTTGCACGGTGATAGAGGAATATGCCATGCTGATCTAAACTGGCCTACCCGATTGAAGATTGTCCAAGGAATTGCAAGAGGGTTGAACTTTCTTCATTCTGAATTCTCTTCCTACGATCTACCCCATGGAAACCTCAAGTCCAGCAATGTTCTACTGAGTGATACTTATGAGCCACTCCTGAATGACTATGCCTACCACCCATTAATCAACCCAAACAGTGTTGTGCAGTCATTGTTTGCCTACAAATCCCCAGATTACGTACAATACCAGAAAGTTTCCCAGAAGACTGACGTTTATTGCCTTGGAATCATCATTCTTGAAATCATCACAGGCAAGTTTCCTTCTCAGTATCATAGCAATGGCAAGGGAGGAACTGATGTTGTGCAGTGGGTGCTCACAGCAATCTCTGAGGGAAGAGAAACAGAGTTGATTGATCCAGAAATAGGAAGCAACACAAGCTCCCTTGATCAAATGCTGCAACTTGTACAAATTGGGGCTGCTTGCTCTGAGAGTAACCCTGACCATCGACTTGACATGGGTGAAGCCATTAGGAGGATAGAGGAGGTACATGTTTGA 1848 0.4632 MAAVRPHFFLPLFLLTLSFFSSSLSITEAEALLKLKKSFTNSDPSLASWLPNTYPCAARWKGVICFDNVISSLHLTDLGLSGMIDIDAIKEIRGLRTLSFAKNNFSGPIPEFNRVGALKALYLSENKFSGSIPQDFFSHLDSLKKIWLDGNKFSGNIPESIVQPEFLKQVHLEDNEFSGPVPAFMQDLITLNVSYNKLEGRIPESVARYGPKAFEGNQGLCGKPLDKACEQHPPALENKQENGSVLKIILIVAVVIIGVLLCCVVARSSSKRRDDDFSVLSRESIDQVVQVHVASSTRSRSSESSRKRISFKRGSTKNGSSDLVVVNDEKGIFGLPDLMKAAAEVLGNGPLGSAYKAAMASGLSVVVKRMREINQISRDAFDAEMRRIGRIRHPNILTPLAYHFRKEEKLFVSEYIPKGSLLYLLHGDRGICHADLNWPTRLKIVQGIARGLNFLHSEFSSYDLPHGNLKSSNVLLSDTYEPLLNDYAYHPLINPNSVVQSLFAYKSPDYVQYQKVSQKTDVYCLGIIILEIITGKFPSQYHSNGKGGTDVVQWVLTAISEGRETELIDPEIGSNTSSLDQMLQLVQIGAACSESNPDHRLDMGEAIRRIEEVHV 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g1977 615 ProSiteProfiles Protein kinase domain profile. 340 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g1977 615 SUPERFAMILY Protein kinase-like (PK-like) 344 610 IPR011009 -
Glsi02g1977 615 SUPERFAMILY L domain-like 27 207 - -
Glsi02g1977 615 Gene3D Ribonuclease Inhibitor 25 185 IPR032675 -
Glsi02g1977 615 Pfam Leucine rich repeat N-terminal domain 27 65 IPR013210 -
Glsi02g1977 615 Gene3D Transferase(Phosphotransferase) domain 1 416 615 - -
Glsi02g1977 615 Pfam Protein kinase domain 344 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g1977 615 Gene3D Phosphorylase Kinase; domain 1 310 415 - -
Glsi02g1977 615 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 14 614 IPR046959 -
Glsi02g1977 615 MobiDBLite consensus disorder prediction 296 318 - -
Glsi02g1977 615 Gene3D Ribonuclease Inhibitor 186 229 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g1977 Glsi-ChrGlsi02 69406785 69409445 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g1977 1 613 Receptor kinase-like Gene Family AT3G42880 50.157 0.0 642
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Glsi02g1977 Pkinase 9.2e-25 CL0016