Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g1966 ATGGAGGGAAGTTGGCAATTCATTCAACTGTATCTGCAGTCTGACCGAGCTTCCCTCTTCTTGACATCGATTGGTTTGCTCAGGTACAAGATGCCAAAAATGATAACCAAGATTGAAGGTAGAGGAAATGGCATCAGGACTAATGCTGTTAGCATGGTTAACATTGCAAAGACCCTGGCTAGACCTGCAGTTTACACTACAAAGTATTTTGGTTGTGAGCTTGGAGCGCACTCAAAATTTGATGGAGGGTTACAAATGTTTTTGTTGCATGCTTTAGAATCTTTTTGTGGAAAAGCAAACAGAGAGGCAGTGAAGGAGGCTGCATTAATCTTGAAGGAGCTTTATGATTGTGATGTGTTGGTGGAGGAGTCTATACTTCAATGGTATGGTATTGGCAAGGCTCAGTTAGCAACAACAAGAGTTCACAAATCTGGAAGGATGTCAAACCCTTCATTGAATGGCTTGAAAATGCTAAAGTCTGAATCTGAGGAAAAATAA 498 0.4096 MEGSWQFIQLYLQSDRASLFLTSIGLLRYKMPKMITKIEGRGNGIRTNAVSMVNIAKTLARPAVYTTKYFGCELGAHSKFDGGLQMFLLHALESFCGKANREAVKEAALILKELYDCDVLVEESILQWYGIGKAQLATTRVHKSGRMSNPSLNGLKMLKSESEEK 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g1966 165 Pfam Domain found in IF2B/IF5 28 88 IPR002735 GO:0003743|GO:0006413
Glsi02g1966 165 Gene3D - 25 94 - -
Glsi02g1966 165 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 28 82 IPR045196 GO:0003743|GO:0006413
Glsi02g1966 165 Pfam eIF4-gamma/eIF5/eIF2-epsilon 85 164 IPR003307 GO:0005515
Glsi02g1966 165 SMART eIF2Bneu4 26 120 IPR002735 GO:0003743|GO:0006413
Glsi02g1966 165 SUPERFAMILY ARM repeat 80 128 IPR016024 -
Glsi02g1966 165 MobiDBLite consensus disorder prediction 145 165 - -
Glsi02g1966 165 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 26 85 IPR016189 GO:0003743|GO:0006413
Glsi02g1966 165 ProSiteProfiles W2 domain profile. 10 165 IPR003307 GO:0005515
Glsi02g1966 165 SMART 542_3 72 164 IPR003307 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g1966 Glsi-ChrGlsi02 69121641 69122898 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g1966 28 81 Eukaryotic Initiation Factors Gene Family AT1G36730 81.481 1.16e-26 102